lineage | Count |
---|---|
lineage4.4.1.1 | 13 |
lineage2.2.1 | 204 |
lineage2.2.1.1 | 2 |
lineage2.2.1;lineage2.2.2 | 1 |
lineage4.4.2 | 1 |
lineage2.2.1;lineage4.3.2.1 | 1 |
lineage2.2.1;lineage4.2.2.1 | 1 |
lineage4.9 | 1 |
lineage4.4.1.1.1;lineage4.8 | 1 |
spoligotype | Count |
---|---|
None | 225 |
ID | Drug resistance | Lineage | Country iso2 | SRR5808262 | Other | lineage4.4.1.1 | ca | SRR924710 | Sensitive | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | ERR4809219 | Sensitive | lineage2.2.1 | za | ERR11465944 | Sensitive | lineage2.2.1 | None | ERR2515807 | Sensitive | lineage2.2.1 | None | ERR9993101 | XDR-TB | lineage2.2.1 | None | SAMN02403500 | MDR-TB | lineage2.2.1 | za | ERR13288855 | RR-TB | lineage2.2.1 | None | ERR2512481 | Sensitive | lineage2.2.1 | gb | ERR2660477 | Sensitive | lineage2.2.1 | None | ERR4809019 | Sensitive | lineage2.2.1 | za | SRR6896457 | Sensitive | lineage2.2.1 | None | ERR13286096 | RR-TB | lineage2.2.1 | None | ERR7821114 | Sensitive | lineage2.2.1 | None | ERR11775578 | Sensitive | lineage2.2.1 | None | ERR400458 | Sensitive | lineage2.2.1 | gb | ERR13285199 | HR-TB | lineage2.2.1 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | ERR2515811 | Sensitive | lineage2.2.1 | za | ERR4808922 | Sensitive | lineage2.2.1 | za | ERR4831554 | MDR-TB | lineage2.2.1 | None | ERR11488764 | RR-TB | lineage2.2.1 | None | SRR6982457 | Sensitive | lineage2.2.1 | None | SRR6855988 | MDR-TB | lineage2.2.1 | None | ERR495069 | Sensitive | lineage2.2.1.1 | None | SRR9971088 | RR-TB | lineage2.2.1 | None | SRR16058434 | Sensitive | lineage4.4.1.1 | None | SRR10159377 | Sensitive | lineage4.4.1.1 | None | SRR2101338 | Sensitive | lineage2.2.1 | None | SRR6896298 | Sensitive | lineage2.2.1 | None | ERR13260823 | Sensitive | lineage2.2.1 | None | SRR6789617 | RR-TB | lineage2.2.1 | None | SRR6982521 | Sensitive | lineage2.2.1 | None | SRR1183082 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975593 | Sensitive | lineage2.2.1 | None | SRR6207279 | Sensitive | lineage2.2.1 | None | SRR9971268 | MDR-TB | lineage2.2.1 | None | SRR2101724 | Sensitive | lineage2.2.1 | None | SRR6982482 | Sensitive | lineage2.2.1 | None | ERR8699228 | Sensitive | lineage2.2.1 | None | ERR13288946 | Pre-XDR-TB | lineage2.2.1 | None | ERR4808874 | RR-TB | lineage2.2.1 | za | SRR10315665 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | SRR1180173 | Pre-XDR-TB | lineage2.2.1 | None | ERR13288936 | XDR-TB | lineage2.2.1 | None | SRR2101587 | Sensitive | lineage2.2.1 | None | ERR2515680 | Sensitive | lineage2.2.1 | za | ERR2660451 | Sensitive | lineage2.2.1 | None | SRR1175338 | MDR-TB | lineage2.2.1 | None | ERR10748214 | MDR-TB | lineage2.2.1 | None | SRR6982320 | Sensitive | lineage2.2.1 | None | SRR1173529 | Other | lineage2.2.1 | None | ERR8975563 | HR-TB | lineage2.2.1 | None | SRR1140956 | Sensitive | lineage2.2.1 | None | ERR9124992 | Sensitive | lineage4.4.1.1 | None | SRR10315499 | MDR-TB | lineage2.2.1 | None | ERR11466252 | Sensitive | lineage2.2.1 | None | ERR11488494 | MDR-TB | lineage2.2.1 | None | ERR2515420 | Sensitive | lineage2.2.1 | za | ERR4809174 | RR-TB | lineage2.2.1 | za | SRR1140898 | MDR-TB | lineage2.2.1 | None | ERR10748544 | MDR-TB | lineage2.2.1 | None | SAMN02053824 | Sensitive | lineage2.2.1 | None | ERR2652934 | Sensitive | lineage4.4.1.1 | None | SRR12708417 | Sensitive | lineage2.2.1 | None | SRR1196551 | MDR-TB | lineage2.2.1 | None | ERR11775595 | Sensitive | lineage2.2.1 | None | ERR11488524 | MDR-TB | lineage2.2.1 | None | SRR6981947 | Sensitive | lineage2.2.1 | None | SAMN02586088 | MDR-TB | lineage2.2.1 | za | SAMN02585958 | Pre-XDR-TB | lineage2.2.1 | za | ERR9124993 | Sensitive | lineage4.4.1.1 | None | ERR4808955 | MDR-TB | lineage2.2.1 | za | ERR4809169 | Sensitive | lineage2.2.1 | za | SRR6896502 | Sensitive | lineage2.2.1 | None | SRR10315565 | RR-TB | lineage2.2.1 | None | ERR9119881 | HR-TB | lineage2.2.1 | None | SRR6152660 | Sensitive | lineage2.2.1 | ca | ERR2513282 | Sensitive | lineage2.2.1 | gb | SRR6982194 | Other | lineage2.2.1 | None | SRR1167322 | MDR-TB | lineage2.2.1 | None | SRR2101542 | Sensitive | lineage2.2.1 | None | ERR11775535 | Sensitive | lineage2.2.1 | None | ERR11775581 | Sensitive | lineage2.2.1 | None | SRR6982006 | Sensitive | lineage2.2.1 | None | SAMN02403501 | MDR-TB | lineage2.2.1 | za | ERR13286138 | Pre-XDR-TB | lineage2.2.1 | None | ERR9993051 | MDR-TB | lineage2.2.1 | None | SRR1175038 | MDR-TB | lineage2.2.1 | None | SRR2101584 | Sensitive | lineage2.2.1 | None | SRR6982013 | Sensitive | lineage2.2.1 | None | SRR1172841 | RR-TB | lineage2.2.1 | None | SRR6896209 | Sensitive | lineage2.2.1 | None | SRR6981972 | Sensitive | lineage2.2.1 | None | ERR9119884 | HR-TB | lineage2.2.1 | None | ERR13260830 | Sensitive | lineage2.2.1 | None | SRR1184370 | MDR-TB | lineage2.2.1 | None | SRR16058423 | Sensitive | lineage4.4.1.1 | None | ERR2660442 | Sensitive | lineage2.2.1 | None | ERR10748476 | MDR-TB | lineage2.2.1 | None | SRR29055972 | Sensitive | lineage2.2.1 | None | ERR5987320 | HR-TB | lineage2.2.1 | None | SRR1173261 | MDR-TB | lineage2.2.1 | None | ERR8975876 | Sensitive | lineage2.2.1 | None | ERR2515532 | MDR-TB | lineage2.2.1 | za | ERR11488653 | MDR-TB | lineage2.2.1 | None | SRR10305741 | Sensitive | lineage2.2.1 | None | ERR4809018 | Sensitive | lineage2.2.1 | za | SRR1165340 | MDR-TB | lineage2.2.1 | None | ERR2652936 | Sensitive | lineage4.4.1.1 | None | ERR2515738 | RR-TB | lineage2.2.1 | None | SRR22249431 | Sensitive | lineage2.2.1 | None | ERR11252565 | Sensitive | lineage2.2.1 | None | ERR4808961 | Sensitive | lineage2.2.1 | za | ERR13286140 | Pre-XDR-TB | lineage2.2.1 | None | SRR6896294 | Sensitive | lineage2.2.1 | None | ERR11466587 | Sensitive | lineage2.2.1 | None | SRR6856097 | Sensitive | lineage2.2.1 | None | SRR1173538 | MDR-TB | lineage2.2.1 | None | SRR6981999 | Sensitive | lineage2.2.1 | None | SRR6855834 | Sensitive | lineage2.2.1 | None | ERR8975541 | Sensitive | lineage2.2.1 | None | ERR2652926 | Sensitive | lineage4.4.1.1 | None | ERR7821165 | Sensitive | lineage2.2.1 | None | SRR6896407 | Sensitive | lineage2.2.1 | None | ERR2515436 | RR-TB | lineage2.2.1 | None | SRR1181385 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173186 | MDR-TB | lineage2.2.1 | None | SRR2101771 | Sensitive | lineage2.2.1 | None | SRR6855916 | Sensitive | lineage2.2.1 | None | SRR6982512 | Sensitive | lineage2.2.1 | None | SRR12708379 | Sensitive | lineage2.2.1 | None | ERR8975606 | Sensitive | lineage2.2.1 | None | ERR11488426 | MDR-TB | lineage2.2.1 | None | ERR9806918 | MDR-TB | lineage2.2.1 | None | ERR2652928 | Sensitive | lineage4.4.1.1 | None | SRR6981911 | Sensitive | lineage2.2.1 | None | SAMN02350455 | Sensitive | lineage2.2.1 | za | ERR7821128 | Sensitive | lineage2.2.1 | None | SRR10305742 | Sensitive | lineage2.2.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR2101513 | Sensitive | lineage2.2.1 | None | ERR13286226 | RR-TB | lineage2.2.1 | None | SRR1165264 | MDR-TB | lineage2.2.1 | None | SAMN02586089 | MDR-TB | lineage2.2.1 | za | SRR6982346 | Sensitive | lineage2.2.1 | None | ERR4808968 | RR-TB | lineage2.2.1 | None | SRR1019129 | Sensitive | lineage2.2.1 | None | SRR1019146 | MDR-TB | lineage2.2.1 | None | ERR11488718 | RR-TB | lineage2.2.1 | None | SRR21676516 | Sensitive | lineage4.4.2 | None | ERR8975654 | Sensitive | lineage2.2.1 | None | SRR10315750 | MDR-TB | lineage2.2.1;lineage4.3.2.1 | None | ERR7737704 | RR-TB | lineage2.2.1 | None | ERR8975511 | RR-TB | lineage2.2.1 | None | ERR11488874 | MDR-TB | lineage2.2.1 | None | ERR2515416 | Sensitive | lineage2.2.1 | None | ERR2515828 | Sensitive | lineage2.2.1 | za | ERR11775589 | Sensitive | lineage2.2.1 | None | SRR6855675 | Other | lineage2.2.1 | None | ERR11775597 | Sensitive | lineage2.2.1 | None | ERR11252540 | Sensitive | lineage2.2.1 | None | ERR13286157 | Sensitive | lineage2.2.1 | None | ERR13286070 | RR-TB | lineage2.2.1 | None | ERR13286135 | Pre-XDR-TB | lineage2.2.1 | None | ERR13286139 | Pre-XDR-TB | lineage2.2.1 | None | ERR13288881 | Sensitive | lineage2.2.1 | None | ERR13288908 | Sensitive | lineage2.2.1 | None | ERR4809286 | Sensitive | lineage2.2.1 | za | ERR8699794 | Sensitive | lineage2.2.1 | None | SRR1167245 | MDR-TB | lineage2.2.1 | None | ERR8975201 | Sensitive | lineage2.2.1 | None | ERR8976041 | Sensitive | lineage2.2.1 | None | SRR2101718 | Sensitive | lineage2.2.1 | None | ERR11465103 | Sensitive | lineage2.2.1 | None | ERR5918078 | HR-TB | lineage2.2.1 | za | ERR11489027 | MDR-TB | lineage2.2.1 | None | SRR6855894 | Sensitive | lineage2.2.1 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR1196472 | MDR-TB | lineage2.2.1 | None | ERR8975059 | Sensitive | lineage2.2.1 | None | ERR8975160 | Sensitive | lineage2.2.1 | None | ERR7821124 | Sensitive | lineage2.2.1 | None | ERR2515831 | Sensitive | lineage2.2.1 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | ERR10610094 | Sensitive | lineage2.2.1 | None | ERR2652951 | Sensitive | lineage4.4.1.1 | None | ERR5918021 | Sensitive | lineage2.2.1 | za | SRR19318148 | Sensitive | lineage2.2.1 | None | ERR2652927 | Sensitive | lineage4.4.1.1 | None | SRR958237 | Sensitive | lineage2.2.1 | None | SRR9971018 | MDR-TB | lineage2.2.1 | None | SRR6982033 | Sensitive | lineage2.2.1 | None | ERR279538 | Sensitive | lineage2.2.1.1 | None | SRR9971110 | MDR-TB | lineage2.2.1 | None | SRR2101543 | Sensitive | lineage2.2.1 | None | ERR2515911 | RR-TB | lineage2.2.1 | za | ERR8975721 | Sensitive | lineage2.2.1 | None | SRR11349151 | MDR-TB | lineage2.2.1 | None | ERR6362702 | HR-TB | lineage2.2.1 | None | ERR11465999 | Sensitive | lineage2.2.1;lineage4.2.2.1 | None | ERR1035157 | Other | lineage4.9 | None | ERR8975203 | Sensitive | lineage2.2.1 | None | SRR2101533 | Sensitive | lineage2.2.1 | None | ERR4809205 | Sensitive | lineage2.2.1 | za | ERR8975193 | Sensitive | lineage2.2.1 | None | ERR13288857 | MDR-TB | lineage2.2.1 | None | ERR8975096 | Sensitive | lineage2.2.1 | None | ERR8975676 | Sensitive | lineage2.2.1 | None | SRR2101332 | Sensitive | lineage2.2.1 | None | ERR8975112 | Sensitive | lineage2.2.1 | None | ERR8975081 | Sensitive | lineage2.2.1 | None | ERR1023476 | Sensitive | lineage2.2.1 | None | ERR4809194 | RR-TB | lineage2.2.1 | None | ERR2515701 | Sensitive | lineage2.2.1 | za | ERR10748208 | MDR-TB | lineage2.2.1 | None | SRR6982114 | Sensitive | lineage2.2.1 | None | ERR4809036 | Sensitive | lineage2.2.1 | za | ERR9124990 | Sensitive | lineage4.4.1.1 | None | SRR6982396 | Sensitive | lineage2.2.1 | None | ERR8975346 | Sensitive | lineage2.2.1 | None | SRR1184338 | MDR-TB | lineage2.2.1 | None | SRR2101301 | Sensitive | lineage2.2.1 | None | SRR10315728 | MDR-TB | lineage4.4.1.1.1;lineage4.8 | None |
---|