lineage | Count |
---|---|
60 | |
lineage4 | 14 |
lineage2.2.2 | 1 |
lineage2.2.1.2 | 1 |
lineage2.2.1 | 3 |
lineage4.9 | 7 |
lineage2.2 | 2 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage4.1 | 1 |
lineage4.1.1 | 1 |
lineage1.1.1.1 | 1 |
lineage4.1.2.1 | 1 |
lineage1.1 | 1 |
lineage3.1 | 2 |
lineage4.1.2 | 1 |
La1.8.1 | 1 |
La1.2 | 1 |
spoligotype | Count |
---|---|
None | 99 |
ID | Drug resistance | Lineage | Country iso2 | ERR8976043 | HR-TB | None | SRR10809074 | Sensitive | lineage4 | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR14801749 | Sensitive | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR13861606 | Sensitive | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None | SRR13861372 | Other | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR20970016 | Other | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR6325445 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR1035239 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675545 | HR-TB | None | ERR2229143 | Other | lineage4.1.1 | None | SRR3675558 | HR-TB | None | SRR3675571 | HR-TB | None | ERR212121 | HR-TB | None | SRR5341300 | Other | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | ERR1035138 | MDR-TB | None | ERR2693239 | HR-TB | None | SRR5341467 | Other | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR6045010 | Other | lineage4 | None | SRR5535933 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045555 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6046133 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6045952 | HR-TB | None | SRR6325442 | HR-TB | None | ERR4828385 | HR-TB | lineage1.1.1.1 | None | SRR6325444 | HR-TB | None | SRR6046492 | Other | None | SRR6046514 | HR-TB | None | ERR278594 | HR-TB | None | ERR4830353 | Other | None | ERR5311099 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR3077978 | Other | lineage1.1 | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | ERR323036 | HR-TB | None | ERR294248 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311090 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323063 | HR-TB | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323038 | HR-TB | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3468544 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797046 | HR-TB | None | ERR4024991 | Other | None | ERR3797083 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4811493 | HR-TB | None | ERR6358837 | HR-TB | None | ERR6358991 | HR-TB | None | ERR6866022 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR736835 | HR-TB | None | ERR4188247 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR6866410 | Sensitive | None | ERR736875 | HR-TB | lineage4 | None |
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