EBG00000313339 - n.1789G>C
Drug resistance types
2 Sensitive
4 RR-TB
2 HR-TB
11 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.1 | 2 |
| lineage4.3.3 | 1 |
| lineage4.1.2.1 | 3 |
| lineage2.2.1 | 4 |
| lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage2.2.1.1 | 3 |
| lineage4.3.3;lineage4.3.4.2 | 1 |
| lineage4.6.1.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.3.4.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 22 |
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1035297 | MDR-TB | lineage4.3.4.1 | br | ERR1213875 | Sensitive | lineage4.3.3 | de | ERR1035294 | MDR-TB | lineage4.1.2.1 | br | SRR1180172 | RR-TB | lineage2.2.1 | None | SRR1183144 | RR-TB | lineage2.2.1 | None | ERR1035296 | HR-TB | lineage4.9 | br | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR1035295 | MDR-TB | lineage4.1.2.1 | br | ERR1213873 | MDR-TB | lineage4.3.4.2.1 | rw | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None | ERR1034911 | MDR-TB | lineage4.3.3;lineage4.3.4.2 | pt | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR11465597 | Sensitive | lineage4.1.2.1 | None | ERR2124083 | HR-TB | lineage4.6.1.2 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR1034902 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR1213874 | MDR-TB | lineage2.2.1 | kr | ERR1034907 | Pre-XDR-TB | lineage4.3.4.1 | pt |
|---|
