Rv1854c - c.996G>C
Drug resistance types
1 Sensitive
1 RR-TB
7 HR-TB
1 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
7 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage4.9 | 1 |
| La1.7;lineage4.9 | 2 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.2.1 | 2 |
| lineage2.2.1 | 1 |
| lineage4.1.2 | 2 |
| lineage2.2.1.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage4.2;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 19 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR11082353 | Pre-XDR-TB | lineage4.2.1 | None | SRR1180172 | Other | lineage2.2.1 | None | ERR13284370 | Pre-XDR-TB | lineage4.2.1 | None | SRR18911457 | Other | lineage4.1.2 | None | SRR1180147 | Other | lineage2.2.1.1 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR16115092 | Other | lineage4.1.2 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR10808730 | Other | lineage4.9 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None |
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