Rv0005 - c.1482C>T

Drug resistance types
93 Sensitive 6 RR-TB 7 HR-TB 2 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 101 Other
lineage Counts
lineage Count
M.canetti 65
lineage4.9 11
La2 117
La1.7.1;lineage4.9 1
lineage2.2.1.1 3
lineage2.1;lineage4.9 1
lineage2.2.1 5
M.canetti;lineage4.9 1
La3;M.canetti 1
lineage4.8 1
lineage1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 1
lineage2.2.1.2;lineage7 1
spoligotype Counts
spoligotype Count
None 209
Geographic prevalence
Country level data for this variant is available for 13 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR10177262 Other M.canetti None
SRR5818448 Other lineage4.9 None
SRR5818405 Other lineage4.9 None
ERR551181 Sensitive M.canetti None
SRR16058674 Other M.canetti None
ERR10430690 Sensitive La2 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR25167937 Sensitive La2 None
ERR10430704 Sensitive La2 None
ERR9125475 Other M.canetti None
SRR5818685 Other M.canetti None
SRR13888790 Other La2 None
ERR4024575 Sensitive La2 None
ERR10430700 Sensitive La2 None
ERR551056 Other M.canetti None
ERR10430685 Sensitive La2 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR5818459 Other lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR266108 Other M.canetti None
ERR10430692 Sensitive La2 None
SRR6045191 Sensitive lineage4.9 None
SRR13888764 Other La2 None
SRR13888770 Sensitive La2 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR10430689 Sensitive La2 None
SRR25167949 Sensitive La2 None
ERR10430694 Sensitive La2 None
SRR13888787 Sensitive La2 None
SRR28170812 Other M.canetti None
SRR18289196 Other M.canetti None
ERR2510206 Sensitive La2 pe
ERR10430681 Sensitive La2 None
SRR20551046 Other La2 None
SRR17729348 HR-TB lineage2.2.1 None
SRR13888766 Other La2 None
ERR266109 Other M.canetti None
ERR266107 Other M.canetti None
ERR3597001 Other M.canetti None
SRR13888765 Sensitive La2 None
ERR10430711 Sensitive La2 None
ERR552304 Other M.canetti None
ERR9121158 Other La2 None
ERR4195478 Other La2 None
ERR10430702 Other La2 None
ERR10430712 RR-TB La2 None
SRR13888794 Other La2 None
ERR4821046 Other M.canetti None
ERR2514193 Sensitive La2 None
SRR5818652 Other M.canetti dj
SRR13888798 Sensitive La2 None
SRR13888757 Other La2 None
SRR13888769 Sensitive La2 None
SRR13888796 Sensitive La2 None
SRR24061599 Other M.canetti None
ERR313115 Other M.canetti None
SRR13888793 Other La2 None
ERR552527 Sensitive La2 None
ERR10430701 Sensitive La2 None
SRR10177263 Other M.canetti None
SRR13888772 Other La2 None
ERR10430719 Sensitive La2 None
SRR1181328 Other lineage2.2.1 None
SRR13888753 Other La2 None
ERR552305 Other M.canetti None
ERR552306 Other M.canetti;lineage4.9 None
ERR1336822 Sensitive M.canetti None
SRR25167942 Sensitive La2 None
ERR108471 HR-TB lineage4.9 None
SRR11418319 Sensitive La2 None
ERR4596910 Sensitive lineage4.9 None
SRR25167924 Other La2 None
SRR1181091 Other lineage2.2.1.1 None
ERR10430698 Sensitive La2 None
ERR266122 Other La3;M.canetti None
SRR10177258 Other M.canetti None
SRR13888752 Other La2 None
SRR6650709 Other M.canetti None
SRR13888749 Sensitive La2 None
ERR7451301 Other M.canetti None
ERR10430707 Sensitive La2 None
SRR20551027 Other La2 None
SRR20551053 Other La2 None
ERR751371 Sensitive La2 pe
SRR13888754 Sensitive La2 None
ERR736856 HR-TB lineage4.9 None
ERR551179 Sensitive M.canetti None
ERR10430717 Sensitive La2 None
SRR22179528 Other M.canetti None
ERR2510183 Sensitive La2 pe
ERR751397 Sensitive La2 pe
SRR13888760 Other La2 None
SRR13888779 Sensitive La2 None
SRR13888782 Sensitive La2 None
SRR24256014 Sensitive lineage4.8 None
SRR13888768 Sensitive La2 None
ERR11050505 Sensitive La2 None
ERR10430703 Sensitive La2 None
SRR5818567 Other M.canetti dj
SRR5818446 Other lineage4.9 None
SRR10522763 Sensitive M.canetti None
SRR13888791 Other La2 None
SRR16058668 Other M.canetti None
ERR4815361 Other M.canetti None
ERR10430682 Sensitive La2 None
ERR266110 Other M.canetti None
ERR551055 Other M.canetti None
ERR4819927 Other M.canetti None
SRR10177259 Other M.canetti None
SRR13888777 Sensitive La2 None
ERR313116 Other M.canetti None
SRR20551024 Other La2 None
SRR5818614 Other M.canetti dj
SRR24061597 Sensitive M.canetti None
ERR10430688 Sensitive La2 None
SRR25167915 Sensitive La2 None
SRR25167925 Other La2 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR551057 Other M.canetti None
SRR25167941 Sensitive La2 None
ERR10430713 Sensitive La2 None
ERR313117 Other M.canetti None
ERR3597007 Other M.canetti None
SRR25167934 Other La2 None
SRR20551054 Other La2 None
ERR551182 Sensitive M.canetti None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR13888786 Sensitive La2 None
ERR4817181 Other M.canetti None
ERR551180 Sensitive M.canetti None
ERR313114 Other M.canetti None
ERR10430716 Sensitive La2 None
SRR20551023 Other La2 None
ERR10430715 Sensitive La2 None
SRR24061598 Other M.canetti None
ERR10430680 Sensitive La2 None
SRR13888785 Sensitive La2 None
SRR5818661 Other M.canetti dj
SRR5818385 Other lineage4.9 None
SRR5818676 Other M.canetti dj
ERR10430686 Sensitive La2 None
SRR20551047 Other La2 None
ERR10430720 Sensitive La2 None
SRR13888799 Other La2 None
SRR13888773 Sensitive La2 None
SRR10177260 Other M.canetti None
SRR5818605 Other M.canetti None
SRR1180172 RR-TB lineage2.2.1 None
SRR1183144 RR-TB lineage2.2.1 None
ERR10430687 Sensitive La2 None
SRR20551026 Other La2 None
ERR7451300 Sensitive M.canetti None
SRR13888751 Sensitive La2 None
ERR10430699 Sensitive La2 None
ERR10430706 Sensitive La2 None
SRR25167914 Sensitive La2 None
SRR13888767 Other La2 None
SRR10177261 Other M.canetti None
SRR18289195 Sensitive M.canetti None
ERR552526 Sensitive La2 cg
ERR4829557 Sensitive La2 it
ERR3597004 Sensitive M.canetti None
SRR13888759 Other La2 None
SRR25167930 Sensitive La2 None
SRR25167948 Sensitive La2 None
ERR266106 Other M.canetti None
ERR10430683 Sensitive La2 None
ERR10430696 Sensitive La2 None
ERR3597003 Other M.canetti None
SRR5818430 Sensitive lineage4.9 None
ERR10430691 Sensitive La2 None
SRR13888763 Other La2 None
SRR24061600 Other M.canetti None
SRR20551028 Other La2 None
ERR10430718 Sensitive La2 None
SRR25167923 Sensitive La2 None
ERR10430705 Sensitive La2 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR13888775 Other La2 None
ERR4816466 HR-TB lineage4.9 None
ERR3597005 Other M.canetti None
ERR10430695 Sensitive La2 None
SRR13888780 Sensitive La2 None
ERR10430684 Sensitive La2 None
SRR13888758 Other La2 None
SRR13888755 Sensitive La2 None
ERR552307 Other M.canetti None
SRR10522783 Sensitive M.canetti None
ERR313113 Other M.canetti None
ERR10430708 Sensitive La2 None
ERR10430693 Sensitive La2 None
ERR3597002 Other M.canetti None
SRR5818668 Other M.canetti dj
SRR13888756 Other La2 None
ERR266120 Other M.canetti None
ERR9125480 Other M.canetti None
ERR4195607 Other La2 None
SRR13888771 Sensitive La2 None
ERR266121 Other M.canetti None
ERR775323 Sensitive La2 None
SRR13888792 Other La2 None
ERR10430714 Sensitive La2 None
SRR20551025 Other La2 None
ERR6865545 Sensitive La2 None
SRR13888788 Sensitive La2 None
SRR5818653 Other M.canetti dj
ERR10430709 Other La2 None
SRR13888762 Other La2 None