Rv0668 - c.3400C>T


Drug resistance types
2 Sensitive 10 RR-TB 21 HR-TB 22 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 26 Other
lineage Counts
lineage Count
lineage4.1.2.1 10
lineage4.2;lineage4.9 2
lineage2.2.2 2
La1.8.1 2
M.canetti;lineage2.1;lineage4.9 17
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.9 6
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
La1.7;M.canetti;lineage4.9 2
lineage1.1.2;lineage4 1
M.canetti;lineage4.9 1
lineage2.1;lineage4.9 2
lineage2.2.1.1 4
lineage2.2.1 4
lineage2.1;lineage2.2;lineage6.3 1
lineage1.1 1
La1.7.1 1
lineage4.4.1.1 1
1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
M.canetti;lineage2.1;lineage4 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
M.canetti;lineage2.2 1
lineage4.1.1.3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 2
M.canetti;lineage4.3.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.2.1 1
M.canetti;lineage2.1;lineage6.3 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.2;lineage4.8.1;lineage4.9 2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
spoligotype Counts
spoligotype Count
None 82
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1162864 Other lineage4.1.2.1 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR13232608 MDR-TB lineage2.2.2 None
ERR3797023 HR-TB La1.8.1 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR1167055 Other lineage4.1.2.1 None
SRR3675269 RR-TB lineage4.9 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR4817692 HR-TB lineage1.1.2;lineage4 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1181091 Other lineage2.2.1.1 None
SRR14165101 Sensitive lineage4.1.2.1 None
SRR1180172 Other lineage2.2.1 None
SRR1165423 RR-TB lineage4.1.2.1 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR1183144 Other lineage2.2.1 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR29093358 MDR-TB lineage2.2.2 None
ERR2509673 Other lineage2.2.1 None
SRR7240492 HR-TB La1.7.1 None
SRR1173453 Other lineage4.4.1.1 None
SRR3675243 Other lineage4.9 None
SRR6044838 Other lineage4.9 None
SRR1640750 Other None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR1165506 Other lineage4.1.2.1 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR2693228 RR-TB lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
SRR1791696 Other La1.8.1 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SAMN02414850 Other lineage4.1.2.1 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4818065 Other lineage4.1.2.1 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR3468607 Other lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR8665994 Other lineage4.9 None
SRR1162740 Other lineage4.1.2.1 None
ERR3468544 Other lineage2.1;lineage4.9 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR9896147 Sensitive lineage2.2.1 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR1165584 Other lineage4.1.2.1 None