Rv0006 - c.1656C>T
Drug resistance types
38 Sensitive
2 RR-TB
4 HR-TB
1 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 24 |
| lineage2.2.1.1 | 4 |
| lineage2.2.1 | 4 |
| lineage1;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage1.1.2 | 3 |
| lineage1.2.2.2 | 7 |
| lineage4.1.2.1 | 3 |
| La1.7.1;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage3;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage4.1.1.3 | 2 |
| lineage4.1;lineage4.9 | 1 |
| 1 | |
| lineage5.1.4 | 1 |
| lineage4 | 3 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 63 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR5341437 | Sensitive | lineage4.9 | None |
| SRR3675247 | Other | lineage4.9 | None |
| SRR1183106 | RR-TB | lineage2.2.1.1 | None |
| SRR2010299 | MDR-TB | lineage2.2.1 | None |
| ERR4797313 | Sensitive | lineage2.2.1 | None |
| ERR4797350 | Sensitive | lineage1;lineage4.9 | None |
| ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None |
| ERR2446424 | Sensitive | lineage1.1.2 | nl |
| SRR3675522 | Other | lineage4.9 | None |
| SRR5341296 | Sensitive | lineage4.9 | None |
| ERR4797424 | Sensitive | lineage1.2.2.2 | in |
| ERR4821686 | Sensitive | lineage4.1.2.1 | None |
| ERR4798880 | Sensitive | lineage1.2.2.2 | in |
| SRR3675279 | Sensitive | lineage4.9 | None |
| SRR3675473 | Sensitive | lineage4.9 | None |
| ERR4797532 | Sensitive | lineage1.2.2.2 | in |
| SRR5341323 | Sensitive | lineage4.9 | None |
| ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None |
| SRR6046564 | Sensitive | lineage4.9 | None |
| SRR12708372 | Sensitive | lineage4.9 | None |
| ERR4812155 | Other | lineage4.9 | None |
| SRR6044819 | Sensitive | lineage4.9 | None |
| SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None |
| SRR5341396 | Other | lineage3;lineage4.9 | None |
| ERR4796550 | Sensitive | lineage1.2.2.2 | in |
| ERR4799346 | Other | lineage1.2.2.2 | None |
| SRR1175496 | Sensitive | lineage4.9 | None |
| SRR3675580 | Sensitive | lineage4.9 | None |
| ERR400320 | Sensitive | lineage4.9 | None |
| SRR12708384 | Sensitive | lineage4.9 | None |
| SRR3675455 | Sensitive | lineage4.9 | None |
| ERR4799105 | Other | lineage1.2.2.2 | in |
| ERR736839 | HR-TB | M.canetti;lineage4.9 | None |
| ERR2512650 | Sensitive | lineage4.1.1.3 | gb |
| SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None |
| SRR3675548 | Sensitive | lineage4.9 | None |
| ERR400326 | Other | lineage4.9 | None |
| ERR11082933 | Sensitive | lineage4.1.2.1 | None |
| SRR1181091 | Other | lineage2.2.1.1 | None |
| SRR3675229 | Sensitive | lineage4.9 | None |
| SRR1180172 | Other | lineage2.2.1 | None |
| ERR3275173 | Sensitive | lineage1.1.2 | nl |
| SRR1184024 | RR-TB | lineage2.2.1.1 | None |
| ERR11082321 | Sensitive | lineage4.1.2.1 | None |
| SRR1180147 | Other | lineage2.2.1.1 | None |
| SRR1183144 | Other | lineage2.2.1 | None |
| SRR12708416 | Sensitive | None | |
| ERR2513283 | Sensitive | lineage5.1.4 | None |
| SRR22175190 | HR-TB | lineage1.2.2.2 | None |
| ERR2517475 | Other | lineage4 | None |
| SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None |
| SRR3675477 | Sensitive | lineage4.9 | None |
| ERR2512770 | Sensitive | lineage4.2.1 | None |
| ERR3275450 | Other | lineage4 | None |
| ERR502943 | Sensitive | lineage2.2.1;lineage4 | None |
| SRR12708371 | HR-TB | lineage4.1.1.3 | None |
| SRR3675514 | Sensitive | lineage4.9 | None |
| ERR2517613 | Sensitive | lineage1.1.2 | nl |
| SRR6046245 | Other | lineage4.9 | None |
| ERR2446382 | Other | lineage4 | None |
| SRR29096387 | Sensitive | M.canetti;lineage4.9 | None |
| SRR3675541 | Sensitive | lineage4.9 | None |
| SRR3675387 | Other | lineage4.9 | None |
