Rv0407 - c.36C>T
Drug resistance types
0 Sensitive
4 RR-TB
8 HR-TB
9 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
17 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 2 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage2.2.1.1 | 3 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage4.9 | 1 |
| lineage2.2.1 | 5 |
| La1.7;M.canetti;lineage4.9 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| M.canetti;lineage4.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.2 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage3 | 1 |
| 1 | |
| lineage4.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 40 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None |
| ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
| SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None |
| ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None |
| ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None |
| SRR1181091 | Other | lineage2.2.1.1 | None |
| SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None |
| SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
| ERR3283018 | HR-TB | lineage4.9 | None |
| SRR1180270 | Other | lineage2.2.1 | None |
| ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None |
| ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None |
| ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None |
| SAMN02585910 | Other | lineage2.2.1 | None |
| SRR1183049 | RR-TB | lineage2.2 | None |
| SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
| ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None |
| ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
| ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
| SRR1180172 | Other | lineage2.2.1 | None |
| ERR403298 | MDR-TB | M.canetti;lineage4.2 | None |
| SRR1183145 | Other | lineage2.2.1 | None |
| SRR1183106 | RR-TB | lineage2.2.1.1 | None |
| ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
| SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
| ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None |
| ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
| SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
| ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None |
| ERR3797028 | HR-TB | M.canetti;lineage4.9 | None |
| ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None |
| ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
| ERR990545 | Other | lineage3 | None |
| SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| SRR1180147 | Other | lineage2.2.1.1 | None |
| SRR1183144 | Other | lineage2.2.1 | None |
| ERR9786843 | Other | None | |
| SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None |
| ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None |
