EBG00000313339 - n.2945G>A
Drug resistance types
9 Sensitive
7 RR-TB
1 HR-TB
5 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
62 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 58 |
| lineage4.2;lineage4.9 | 2 |
| lineage4.3.3 | 1 |
| lineage4.3.2.1 | 2 |
| La1.8.1 | 9 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.4 | 1 |
| lineage2.2.1.1 | 4 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| lineage4 | 1 |
| lineage4.9 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage1.2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 85 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR16295749 | Other | lineage2.2.1 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | SRR16295752 | Other | lineage2.2.1 | None | SRR21657198 | HR-TB | lineage4.3.3 | None | SRR2101540 | Sensitive | lineage4.3.2.1 | None | SRR16295746 | Other | lineage2.2.1 | None | SRR16295744 | Other | lineage2.2.1 | None | SRR16295808 | Other | lineage2.2.1 | None | SRR16295801 | Other | lineage2.2.1 | None | SRR5067471 | Sensitive | lineage2.2.1 | None | SRR16295763 | Other | lineage2.2.1 | None | SRR16295751 | Other | lineage2.2.1 | None | ERR4188187 | Sensitive | La1.8.1 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR16295810 | Other | lineage2.2.1 | None | SRR16278273 | Other | La1.4 | None | SRR16295762 | Other | lineage2.2.1 | None | SRR16295776 | Other | lineage2.2.1 | None | ERR3797013 | Other | La1.8.1 | None | SRR16295806 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR7240350 | Other | La1.8.1 | None | SRR6981948 | Sensitive | lineage4.3.2.1 | None | ERR3797007 | Other | La1.8.1 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR16295760 | Other | lineage2.2.1 | None | ERR5311076 | Other | La1.8.1 | None | ERR4457869 | Sensitive | lineage4 | None | ERR4188254 | Other | La1.8.1 | None | SRR1180172 | RR-TB | lineage2.2.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR16295817 | Other | lineage2.2.1 | None | SRR1183144 | RR-TB | lineage2.2.1 | None | SRR1792265 | Other | La1.8.1 | None | SRR16295790 | Other | lineage2.2.1 | None | SRR16295742 | Other | lineage2.2.1 | None | SRR16295741 | Other | lineage2.2.1 | None | SRR16295748 | Other | lineage2.2.1 | None | SRR16295769 | Other | lineage2.2.1 | None | SRR16295738 | Other | lineage2.2.1 | None | SRR16295813 | Other | lineage2.2.1 | None | SRR16295828 | Other | lineage2.2.1 | None | SRR16295772 | Other | lineage2.2.1 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR16295745 | Other | lineage2.2.1 | None | SRR16295773 | Other | lineage2.2.1 | None | ERR4769482 | Sensitive | lineage4.9 | None | SRR16295811 | Other | lineage2.2.1 | None | SRR16295826 | Other | lineage2.2.1 | None | SRR6046397 | RR-TB | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR5311088 | Sensitive | La1.8.1 | None | SRR8600071 | Other | La1.8.1 | None | SRR16295740 | Other | lineage2.2.1 | None | SRR16295824 | Other | lineage2.2.1 | None | SRR16295754 | Other | lineage2.2.1 | None | SRR16295770 | Other | lineage2.2.1 | None | SRR16295777 | Other | lineage2.2.1 | None | SRR16295819 | Other | lineage2.2.1 | None | SRR16295807 | Other | lineage2.2.1 | None | SRR16295822 | Other | lineage2.2.1 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | SRR16295798 | Other | lineage2.2.1 | None | SRR16295766 | Other | lineage2.2.1 | None | SRR16295812 | Other | lineage2.2.1 | None | SRR16295782 | Other | lineage2.2.1 | None | SRR16295816 | Other | lineage2.2.1 | None | SRR16295747 | Other | lineage2.2.1 | None | SRR16295829 | Other | lineage2.2.1 | None | ERR245662 | Sensitive | lineage1.2.2.1 | None | SRR16295765 | Other | lineage2.2.1 | None | SRR16295779 | Other | lineage2.2.1 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR16295799 | Other | lineage2.2.1 | None | SRR16295804 | Other | lineage2.2.1 | None | SRR16295830 | Other | lineage2.2.1 | None | SRR16295761 | Other | lineage2.2.1 | None | SRR16295739 | Other | lineage2.2.1 | None | ERR5311086 | Sensitive | lineage4.9 | None | SRR16295753 | Other | lineage2.2.1 | None | SRR16295775 | Other | lineage2.2.1 | None | SRR16295743 | Other | lineage2.2.1 | None | SRR16295809 | Other | lineage2.2.1 | None |
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