Rv3596c - c.417C>T
Drug resistance types
4 Sensitive
3 RR-TB
9 HR-TB
0 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
36 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage6.1.3 | 1 |
| lineage1.1.2 | 2 |
| La1.8.1 | 24 |
| lineage4.1.2 | 1 |
| lineage4.9 | 8 |
| lineage2.2.1.1 | 4 |
| lineage4.4.1.2 | 1 |
| lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2.2.1 | 3 |
| La1.7;lineage4.9 | 2 |
| lineage4.2;lineage4.9 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.3.2.1 | 1 |
| lineage3 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 53 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR11067881 | HR-TB | lineage1.1.2 | None | ERR564447 | Other | La1.8.1 | None | SRR7617448 | Other | La1.8.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR6046492 | Other | lineage4.9 | None | SRR5216888 | Other | La1.8.1 | None | SRR7617589 | Other | La1.8.1 | None | SRR7617586 | Other | La1.8.1 | None | SRR5216920 | Other | La1.8.1 | None | SRR7617735 | Other | La1.8.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR7617587 | Other | La1.8.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR5216831 | Other | La1.8.1 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR7617484 | Other | La1.8.1 | None | SRR5216932 | Other | La1.8.1 | None | SRR5216860 | Other | La1.8.1 | None | SRR7617809 | Other | La1.8.1 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR564372 | Other | La1.8.1 | None | SRR7617797 | Other | La1.8.1 | None | SRR5216690 | Other | La1.8.1 | None | SRR7617590 | Other | La1.8.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR5341456 | Other | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | SRR5216775 | Other | La1.8.1 | None | SRR6044780 | Sensitive | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR7617591 | Other | La1.8.1 | None | SRR7617785 | Other | La1.8.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR4816130 | Sensitive | lineage3 | gb | SRR5216877 | Other | La1.8.1 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR7617440 | Other | La1.8.1 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR7617832 | Other | La1.8.1 | None | SRR22137424 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR7617389 | Other | La1.8.1 | None |
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