Rv0001 - c.1347C>T


Drug resistance types
3 Sensitive 6 RR-TB 20 HR-TB 7 MDR-TB 0 Pre-XDR-TB 2 XDR-TB 13 Other
lineage Counts
lineage Count
lineage2.2.1.1 2
lineage2.1;lineage4.9;lineage6.3 1
lineage4.2;lineage4.9 3
lineage4.9 8
lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage2.2 2
lineage2.2.2 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage2.1;lineage4.3.2;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.7;M.canetti;lineage4.9 2
lineage4.2;lineage4.8.1;lineage4.9 2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage2.2.1 2
2
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage6.1.2 2
La1.6;La3;lineage4.6.4;lineage4.9 1
M.canetti;lineage4.9 2
La1.2;La1.8.1 1
lineage4 1
lineage4.9;lineage9 1
lineage2.1;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.9 1
La1.7;lineage4.9 1
spoligotype Counts
spoligotype Count
None 51
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1180147 RR-TB lineage2.2.1.1 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR4816466 HR-TB lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR1180172 RR-TB lineage2.2.1 None
SRR1183144 RR-TB lineage2.2.1 None
ERR234659 HR-TB None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR3801361 Sensitive lineage6.1.2 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR124636 HR-TB lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR12416842 HR-TB lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786843 Other None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR702405 HR-TB lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR9787246 Sensitive lineage6.1.2 None
SRR1167384 Other La3;lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None