Rv3793 - c.3066A>G
Drug resistance types
80 Sensitive
12 RR-TB
28 HR-TB
10 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
44 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 100 |
| lineage4.9 | 24 |
| lineage2.2.1 | 2 |
| lineage1.1.3.1 | 1 |
| 3 | |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 4 |
| lineage2.1 | 2 |
| lineage2.2.1.1 | 2 |
| La1.7;lineage4.9 | 2 |
| lineage3 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.2;lineage4.9 | 2 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.9;lineage6.3 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage4 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage2.1;lineage6.3 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.2.1;lineage4.8 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.1.2 | 1 |
| lineage2.2 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 181 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21736958 | Other | lineage4.8 | None | ERR4799025 | Other | lineage4.8 | None | SRR29124317 | Sensitive | lineage4.8 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR11043222 | Sensitive | lineage4.8 | None | ERR2446566 | Other | lineage4.9 | None | ERR4195840 | Sensitive | lineage4.8 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR21732635 | Sensitive | lineage4.8 | None | SRR7069815 | Sensitive | lineage4.8 | None | SRR7069582 | Sensitive | lineage4.8 | None | SRR15316122 | Sensitive | lineage2.2.1 | None | ERR10969245 | Sensitive | lineage4.8 | None | ERR124636 | Sensitive | lineage4.9 | None | SRR28119753 | Other | lineage4.9 | None | SRR22048552 | Sensitive | lineage4.8 | None | ERR4819442 | Sensitive | lineage4.8 | gb | ERR11049948 | Sensitive | lineage4.8 | None | ERR11043599 | Sensitive | lineage4.8 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9117709 | Other | None | ERR9125727 | Sensitive | lineage4.8 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR11082977 | Sensitive | lineage4.8 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR4819729 | Sensitive | lineage4.8 | gb | SRR28119752 | Other | lineage4.9 | None | ERR4829856 | Other | lineage4.8 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR24466767 | MDR-TB | lineage4.8 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR29356818 | Sensitive | lineage4.8 | None | ERR5979499 | Sensitive | lineage4.8 | None | ERR4816736 | Sensitive | lineage4.8 | gb | SRR11662690 | HR-TB | lineage4.9 | None | ERR11049163 | Sensitive | lineage4.8 | None | ERR4819865 | Sensitive | lineage4.8 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR9121423 | Sensitive | lineage4.8 | None | SRR3544721 | Sensitive | lineage4.8 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | ERR13267660 | Sensitive | lineage4.8 | None | SRR7068876 | Other | lineage4.8 | None | ERR11049973 | Sensitive | lineage4.8 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR11044879 | Sensitive | lineage4.8 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR11067402 | Sensitive | lineage4.8 | None | ERR4829713 | Pre-XDR-TB | lineage4.8 | it | ERR12268417 | Sensitive | lineage4.8 | None | ERR4831363 | Sensitive | lineage4.8 | de | ERR9121444 | Sensitive | lineage4.8 | None | SRR24222993 | Sensitive | lineage4.8 | None | ERR736848 | Other | lineage4.9 | None | SRR29341606 | Sensitive | lineage4.8 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR29273796 | MDR-TB | lineage4.8 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR29274064 | Pre-XDR-TB | lineage4.8 | None | SRR29273602 | MDR-TB | lineage4.8 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR6046593 | Other | lineage4.9 | None | SRR29273774 | Pre-XDR-TB | lineage4.8 | None | ERR4816758 | Other | lineage4.8 | gb | SRR24466758 | Sensitive | lineage4.8 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR29273941 | MDR-TB | lineage4.8 | None | ERR4821356 | Sensitive | lineage4.8 | None | ERR4828814 | Sensitive | lineage4.8 | None | ERR4816289 | Other | lineage4.8 | gb | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | SRR29274186 | RR-TB | lineage4.8 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR11081270 | RR-TB | lineage4.8 | None | SRR29681337 | Sensitive | lineage4.8 | None | SRR19304102 | Sensitive | lineage4.8 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR19303801 | Sensitive | lineage4.8 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR29274136 | RR-TB | lineage4.8 | None | ERR4821478 | Sensitive | lineage4.8 | gb | ERR6359082 | Other | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR5979532 | Sensitive | lineage4.8 | None | SRR9738508 | RR-TB | lineage4.8 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR4195451 | Sensitive | lineage4.8 | None | SRR16058016 | Sensitive | lineage4.8 | None | ERR4815169 | Other | lineage4.8 | gb | SRR24466765 | Sensitive | lineage4.8 | None | SRR6832271 | Sensitive | lineage4.8 | None | ERR5979538 | Sensitive | lineage4.1.2.1;lineage4.8 | None | SRR29273812 | Pre-XDR-TB | lineage4.8 | None | ERR13290169 | Sensitive | lineage4.8 | None | ERR2514767 | Sensitive | lineage4.8 | None | ERR4819643 | Sensitive | lineage4.8 | gb | ERR736872 | HR-TB | lineage4.9 | None | ERR4818180 | Other | lineage4.8 | gb | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR1166100 | RR-TB | lineage4.8 | ro | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR11068662 | Sensitive | lineage4.8 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6046046 | Other | lineage4.9 | None | SRR7131068 | Other | lineage4.8 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR4828936 | Sensitive | lineage4.8 | it | ERR4818912 | Sensitive | lineage4.8 | gb | ERR11043580 | Sensitive | lineage4.8 | None | ERR13276293 | RR-TB | lineage4.8 | None | ERR11067715 | Sensitive | lineage4.8 | None | SRR14782054 | Other | lineage4.9 | None | ERR2510768 | Sensitive | lineage4.8 | it | ERR13267653 | Sensitive | lineage4.8 | None | SRR29273771 | MDR-TB | lineage4.8 | None | ERR4769450 | Other | lineage4.9 | None | ERR9121438 | Sensitive | lineage4.8 | None | SRR18337410 | Sensitive | lineage4.8 | None | SRR19303811 | Sensitive | lineage4.8 | None | ERR5979524 | Sensitive | lineage4.8 | None | SRR5341453 | Other | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1465875 | MDR-TB | lineage4.8 | None | ERR13276306 | RR-TB | lineage4.8 | None | ERR4817892 | Sensitive | lineage4.8 | gb | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR6045453 | Sensitive | lineage4.8 | gb | ERR9787197 | Other | None | ERR234659 | Other | None | ERR11049224 | Sensitive | lineage4.8 | None | ERR4820964 | Sensitive | lineage4.8 | gb | SRR12142341 | HR-TB | lineage2.1 | None | SRR19303880 | Sensitive | lineage4.8 | None | SRR7068972 | Sensitive | lineage4.8 | None | ERR11069038 | Sensitive | lineage4.8 | None | SRR28646073 | Sensitive | lineage4.8 | None | SRR28646063 | RR-TB | lineage4.8 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3675270 | Other | lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR11081518 | RR-TB | lineage4.8 | None | ERR2512970 | Sensitive | lineage4.8 | gb | SRR13180202 | Sensitive | lineage4.8 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR18337409 | Sensitive | lineage4.8 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR11049310 | Sensitive | lineage4.8 | None | SRR7131036 | Sensitive | lineage4.8 | None | ERR4195835 | Sensitive | lineage4.8 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR2199958 | Sensitive | lineage4.8 | de | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR29273962 | RR-TB | lineage4.8 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None |
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