EBG00000313339 - n.19G>A
Drug resistance types
32 Sensitive
4 RR-TB
17 HR-TB
1 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
22 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 25 |
| 14 | |
| lineage4.9 | 10 |
| lineage1.1.2 | 2 |
| lineage3.1.2 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage2.2.1 | 7 |
| lineage2.2.1.1 | 1 |
| lineage4.8 | 4 |
| lineage4.1.1.3 | 1 |
| lineage3 | 4 |
| lineage4.3.2.1 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.7 | 1 |
| lineage1.1.3.1 | 1 |
| lineage3.1.3 | 1 |
| La2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 77 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3797081 | Sensitive | lineage4 | None | ERR4798431 | HR-TB | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4798139 | Sensitive | lineage1.1.2 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR736865 | HR-TB | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1173788 | Other | None | SRR1174897 | HR-TB | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1172310 | HR-TB | None | SRR1180172 | Other | lineage2.2.1 | None | SRR11972366 | Sensitive | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR176740 | HR-TB | None | SRR21277082 | Sensitive | lineage2.2.1 | None | SRR8692759 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR4816833 | Other | lineage4.1.1.3 | None | SRR3675571 | HR-TB | None | ERR4817434 | Other | lineage3 | None | SRR5341470 | HR-TB | None | ERR752215 | Sensitive | lineage2.2.1 | th | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR3275190 | Other | lineage3 | nl | ERR2446509 | Other | lineage3 | nl | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045503 | HR-TB | None | ERR4821288 | Other | lineage4.7 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6046117 | RR-TB | lineage4.9 | None | SRR6045613 | Other | lineage3.1.3 | None | ERR2851354 | RR-TB | lineage4.9 | None | SRR6045894 | Other | lineage4.8 | None | SRR6045909 | Other | lineage4.8 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046397 | Other | None | ERR4811129 | Sensitive | lineage2.2.1 | cn | ERR4810973 | MDR-TB | lineage2.2.1 | cn | SRR6046442 | Other | lineage3 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046739 | Other | lineage1.1.2 | None | SRR6046802 | Other | lineage4 | None | SRR6046497 | Other | lineage4.9 | None | SRR6046897 | Sensitive | lineage4 | None | ERR294266 | HR-TB | None | SRR7131123 | Other | lineage4.8 | None | ERR502524 | HR-TB | La2 | None | ERR349298 | Sensitive | lineage4 | None | ERR323039 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR323053 | HR-TB | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349299 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373946 | Sensitive | lineage4 | None |
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