lineage | Count |
---|---|
90 | |
lineage4.9 | 6 |
lineage4.1 | 1 |
lineage2.2.1 | 3 |
lineage4.3.4.2.1 | 1 |
lineage4.3 | 1 |
lineage4 | 8 |
lineage4.1.1.3 | 1 |
lineage4.9;lineage3 | 1 |
lineage4.1.2.1 | 2 |
La1.7.X-unk4 | 1 |
lineage3.1 | 2 |
lineage1.1 | 1 |
lineage4.6.2.2 | 2 |
lineage3 | 1 |
La1 | 1 |
lineage2.2 | 1 |
lineage4.3.2 | 1 |
lineage4.8;lineage4.1 | 1 |
La3 | 1 |
lineage2.2.1.1 | 3 |
lineage4.5 | 1 |
spoligotype | Count |
---|---|
None | 130 |
ID | Drug resistance | Lineage | Country iso2 | ERR158583 | HR-TB | None | SRR1640750 | HR-TB | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR6325445 | HR-TB | None | ERR12328149 | HR-TB | lineage2.2.1 | None | ERR1035239 | HR-TB | None | SRR3675234 | Other | None | ERR161033 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675488 | HR-TB | None | ERR181744 | HR-TB | None | SRR3675222 | Other | None | SRR3675486 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675312 | HR-TB | lineage4 | None | ERR176643 | HR-TB | None | SRR3675501 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675502 | Other | None | ERR212033 | HR-TB | None | SRR3675545 | HR-TB | None | ERR212001 | HR-TB | None | SRR3675550 | Other | None | ERR212121 | HR-TB | None | SRR3675558 | HR-TB | None | SRR3675574 | HR-TB | None | ERR2693239 | HR-TB | None | SRR3675571 | HR-TB | None | ERR2514692 | Other | None | ERR2693231 | Other | None | ERR4816466 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR5341418 | Other | None | SRR6045526 | HR-TB | None | ERR2693230 | Other | None | SRR6045503 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046239 | Other | lineage4.9;lineage3 | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6046397 | Other | None | SRR6046362 | HR-TB | None | ERR278594 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046460 | HR-TB | None | ERR4830353 | Other | None | SRR6046482 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6325447 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR323036 | HR-TB | None | ERR2815521 | Other | La1.7.X-unk4 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR294248 | HR-TB | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR323038 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311099 | HR-TB | None | ERR502889 | Other | None | ERR5311081 | HR-TB | None | ERR067681 | HR-TB | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR3283017 | HR-TB | None | ERR2512830 | Sensitive | lineage3 | gb | ERR133986 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR1034652 | Other | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3439432 | Other | None | ERR3283025 | HR-TB | None | ERR3283024 | Other | None | ERR3283032 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | None | ERR3797014 | Other | None | ERR3445502 | HR-TB | lineage4 | None | ERR3468544 | HR-TB | None | ERR373945 | HR-TB | lineage4 | None | ERR3797016 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR3797036 | HR-TB | None | ERR3797044 | Other | None | ERR3797082 | Other | lineage4.9 | None | ERR387051 | HR-TB | None | ERR3797017 | Other | None | ERR3797043 | HR-TB | None | ERR3797083 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4188350 | HR-TB | None | ERR6358991 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6358837 | HR-TB | None | ERR736839 | Other | None | ERR702404 | HR-TB | None | ERR736835 | HR-TB | None | ERR6359045 | HR-TB | None | ERR736848 | HR-TB | None | ERR9119669 | HR-TB | None | ERR8976043 | HR-TB | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | SRR1180172 | Other | lineage2.2.1 | None | ERR9786843 | Other | None | SRR1169249 | Other | La3 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1167384 | Other | lineage4 | None | SRR1169306 | Other | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR13423544 | Other | lineage4.5 | None | SRR13861666 | Sensitive | lineage4.9 | None |
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