lineage | Count |
---|---|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
lineage4.9 | 6 |
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
M.canetti;lineage4.9 | 2 |
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
M.canetti;lineage2.1;lineage6.3 | 1 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 2 |
lineage2.2.1 | 2 |
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
lineage4.2;lineage4.9 | 1 |
La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
La3;lineage4.9 | 1 |
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
lineage4.1;lineage4.8 | 1 |
M.canetti;lineage4.2;lineage4.9 | 1 |
M.canetti;lineage4.9;lineage9 | 1 |
La1.6;La3;M.canetti;lineage4.2.2 | 1 |
lineage4.6.3;lineage4.9 | 1 |
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
La1.7;M.canetti;lineage4.9 | 1 |
lineage2.2.1.1 | 1 |
1 |
spoligotype | Count |
---|---|
None | 37 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None |
SRR6325442 | HR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None |
ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None |
ERR3283040 | HR-TB | lineage4.9 | None |
ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None |
ERR736839 | HR-TB | M.canetti;lineage4.9 | None |
ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None |
SRR6045399 | Other | M.canetti;lineage4.9 | None |
SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None |
SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
SRR1180172 | Other | lineage2.2.1 | None |
ERR6358837 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None |
ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None |
ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None |
ERR3283030 | HR-TB | lineage4.9 | None |
ERR3797015 | HR-TB | lineage4.9 | None |
SRR28119827 | Other | La3;lineage4.9 | None |
ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None |
SRR1183144 | Other | lineage2.2.1 | None |
ERR9786525 | Other | lineage4.1;lineage4.8 | None |
ERR3283042 | Other | lineage4.9 | None |
SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None |
ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None |
SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
SRR6046577 | Other | lineage4.6.3;lineage4.9 | None |
SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None |
SRR11662694 | Other | lineage4.9 | None |
SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None |
SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None |
ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None |
ERR3283018 | HR-TB | lineage4.9 | None |
SRR1183106 | RR-TB | lineage2.2.1.1 | None |
ERR9786843 | Other | None | |
SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |