EBG00000313339 - n.2938C>T
Drug resistance types
17 Sensitive
2 RR-TB
3 HR-TB
3 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
93 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 3 |
| lineage2.2.1 | 79 |
| lineage2.2.1.1 | 4 |
| La1.8.1 | 14 |
| La1.2 | 1 |
| lineage4.2;lineage4.9 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.3.3 | 2 |
| lineage4.1.2.1 | 1 |
| lineage4.3.2.1 | 2 |
| lineage1.2.2.1 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.2.1 | 1 |
| lineage1.1.1 | 4 |
| La1.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 120 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR5311086 | Sensitive | lineage4.9 | None | SRR16295824 | Other | lineage2.2.1 | None | SRR16295777 | Other | lineage2.2.1 | None | SRR16295820 | Other | lineage2.2.1 | None | SRR16295763 | Other | lineage2.2.1 | None | SRR16295747 | Other | lineage2.2.1 | None | SRR16295779 | Other | lineage2.2.1 | None | SRR16295812 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR7240350 | Other | La1.8.1 | None | SRR1180172 | Other | lineage2.2.1 | None | ERR4769478 | Other | La1.2 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR16295799 | Other | lineage2.2.1 | None | SRR16295760 | Other | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1792265 | Other | La1.8.1 | None | SRR16295739 | Other | lineage2.2.1 | None | SRR16295743 | Other | lineage2.2.1 | None | SRR16295751 | Other | lineage2.2.1 | None | SRR16295822 | Other | lineage2.2.1 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | SRR16295809 | Other | lineage2.2.1 | None | SRR16295810 | Other | lineage2.2.1 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR16295792 | Other | lineage2.2.1 | None | SRR16295829 | Other | lineage2.2.1 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR16295764 | Other | lineage2.2.1 | None | SRR16295771 | Other | lineage2.2.1 | None | SRR16295798 | Other | lineage2.2.1 | None | SRR21714038 | Sensitive | lineage4.3.3 | None | SRR16295749 | Other | lineage2.2.1 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | ERR3797013 | Other | La1.8.1 | None | SRR18149455 | Sensitive | lineage4.1.2.1 | None | SRR16295746 | Other | lineage2.2.1 | None | SRR16295789 | Sensitive | lineage2.2.1 | None | SRR2101540 | Sensitive | lineage4.3.2.1 | None | ERR4187916 | Other | La1.8.1 | None | SRR5067471 | Sensitive | lineage2.2.1 | None | SRR16295762 | Other | lineage2.2.1 | None | SRR16295821 | Other | lineage2.2.1 | None | SRR16295757 | Other | lineage2.2.1 | None | ERR3797007 | Other | La1.8.1 | None | SRR16295765 | Other | lineage2.2.1 | None | SRR16295740 | Other | lineage2.2.1 | None | SRR26399602 | Sensitive | lineage2.2.1 | None | SRR16295769 | Other | lineage2.2.1 | None | SRR16295773 | Other | lineage2.2.1 | None | SRR16295791 | Other | lineage2.2.1 | None | ERR245662 | Sensitive | lineage1.2.2.1 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR4188254 | Other | La1.8.1 | None | SRR16295767 | Other | lineage2.2.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR16295761 | Other | lineage2.2.1 | None | SRR16295797 | Other | lineage2.2.1 | None | ERR5311076 | Other | La1.8.1 | None | SRR16295790 | Other | lineage2.2.1 | None | SRR6981948 | Sensitive | lineage4.3.2.1 | None | ERR4188187 | Sensitive | La1.8.1 | None | SRR16295786 | Other | lineage2.2.1 | None | SRR16295741 | Other | lineage2.2.1 | None | SRR16295753 | Other | lineage2.2.1 | None | SRR16295816 | Other | lineage2.2.1 | None | SRR16295828 | Other | lineage2.2.1 | None | SRR16295780 | Other | lineage2.2.1 | None | SRR16295742 | Other | lineage2.2.1 | None | SRR16295766 | Other | lineage2.2.1 | None | SRR8600071 | Other | La1.8.1 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR16295775 | Other | lineage2.2.1 | None | SRR16295806 | Other | lineage2.2.1 | None | SRR16295738 | Other | lineage2.2.1 | None | SRR16295788 | Other | lineage2.2.1 | None | ERR4769482 | Sensitive | lineage4.9 | None | SRR16295776 | Other | lineage2.2.1 | None | SRR16295825 | Other | lineage2.2.1 | None | SRR16295744 | Other | lineage2.2.1 | None | SRR7236233 | Other | La1.8.1 | None | ERR4769525 | Sensitive | lineage4.9 | None | SRR16295801 | Other | lineage2.2.1 | None | ERR4819876 | Other | lineage4.3.4.2.1 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | ERR4188213 | Other | La1.8.1 | None | SRR16295819 | Other | lineage2.2.1 | None | ERR10762317 | Pre-XDR-TB | lineage4.2.1 | None | ERR4828524 | Other | lineage1.1.1 | vn | SRR16295811 | Other | lineage2.2.1 | None | SRR16295807 | Other | lineage2.2.1 | None | SRR16295734 | Sensitive | lineage2.2.1 | None | SRR16278273 | Other | La1.4 | None | ERR4187993 | Sensitive | La1.8.1 | None | ERR4188160 | Other | La1.8.1 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR16295804 | Other | lineage2.2.1 | None | SRR16295772 | Other | lineage2.2.1 | None | SRR16295793 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR16295737 | Other | lineage2.2.1 | None | SRR16295745 | Other | lineage2.2.1 | None | SRR16295782 | Other | lineage2.2.1 | None | SRR16295815 | Sensitive | lineage2.2.1 | None | SRR16295770 | Other | lineage2.2.1 | None | SRR16295808 | Other | lineage2.2.1 | None | SRR21657198 | HR-TB | lineage4.3.3 | None | SRR16295784 | Other | lineage2.2.1 | None | SRR16295817 | Other | lineage2.2.1 | None | ERR4828585 | Other | lineage1.1.1 | vn | SRR16295748 | Other | lineage2.2.1 | None | SRR16295752 | Other | lineage2.2.1 | None | ERR2843440 | Other | lineage1.1.1 | None | SRR16295830 | Other | lineage2.2.1 | None | ERR5311088 | Sensitive | La1.8.1 | None | ERR2843439 | Other | lineage1.1.1 | None | SRR16295813 | Other | lineage2.2.1 | None | SRR16295826 | Other | lineage2.2.1 | None | SRR16295750 | Other | lineage2.2.1 | None | SRR16295754 | Other | lineage2.2.1 | None |
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