EBG00000313339 - n.2938C>T
Drug resistance types
20 Sensitive
0 RR-TB
6 HR-TB
4 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
114 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.1 | 4 |
| lineage2.2.1 | 88 |
| La1.4 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.6.3 | 2 |
| La1.8.1 | 19 |
| lineage4.1.2.1 | 2 |
| lineage4.3.3 | 2 |
| lineage1.2.2.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.8 | 2 |
| 4 | |
| lineage4.3.4.2.1 | 2 |
| lineage3 | 3 |
| lineage4.2.1.1 | 1 |
| lineage1.1.1 | 4 |
| lineage4.2.1 | 1 |
| lineage4.9;La1.8.1 | 1 |
| lineage4.9 | 3 |
| La1 | 1 |
| La1.2 | 1 |
| lineage1.1.2 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.1.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 148 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR13423641 | MDR-TB | lineage2.2.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR16295737 | Other | lineage2.2.1 | None | SRR16278273 | Other | La1.4 | None | SRR16295743 | Other | lineage2.2.1 | None | SRR16295741 | Other | lineage2.2.1 | None | SRR16295740 | Other | lineage2.2.1 | None | SRR16295745 | Other | lineage2.2.1 | None | SRR16295742 | Other | lineage2.2.1 | None | SRR16295749 | Other | lineage2.2.1 | None | SRR16295747 | Other | lineage2.2.1 | None | SRR16295744 | Other | lineage2.2.1 | None | SRR16295746 | Other | lineage2.2.1 | None | SRR16295735 | Sensitive | lineage2.2.1 | None | SRR16295750 | Other | lineage2.2.1 | None | SRR16295751 | Other | lineage2.2.1 | None | SRR16295748 | Other | lineage2.2.1 | None | SRR16295754 | Other | lineage2.2.1 | None | SRR16295752 | Other | lineage2.2.1 | None | SRR16295753 | Other | lineage2.2.1 | None | SRR16295763 | Other | lineage2.2.1 | None | SRR16295757 | Other | lineage2.2.1 | None | SRR16295761 | Other | lineage2.2.1 | None | SRR16295760 | Other | lineage2.2.1 | None | SRR16295762 | Other | lineage2.2.1 | None | SRR16295766 | Other | lineage2.2.1 | None | SRR16295765 | Other | lineage2.2.1 | None | SRR16295764 | Other | lineage2.2.1 | None | SRR16295770 | Other | lineage2.2.1 | None | SRR16295771 | Other | lineage2.2.1 | None | SRR16295738 | Other | lineage2.2.1 | None | SRR16295769 | Other | lineage2.2.1 | None | SRR16295767 | Other | lineage2.2.1 | None | SRR16295775 | Other | lineage2.2.1 | None | SRR16295773 | Other | lineage2.2.1 | None | SRR16295777 | Other | lineage2.2.1 | None | SRR16295772 | Other | lineage2.2.1 | None | SRR16295779 | Other | lineage2.2.1 | None | SRR16295734 | Other | lineage2.2.1 | None | SRR16295739 | Other | lineage2.2.1 | None | SRR16295732 | Other | lineage2.2.1 | None | SRR16295782 | Other | lineage2.2.1 | None | SRR16295786 | Other | lineage2.2.1 | None | SRR16295790 | Other | lineage2.2.1 | None | SRR16295776 | Other | lineage2.2.1 | None | SRR16295783 | Other | lineage2.2.1 | None | SRR16295791 | Other | lineage2.2.1 | None | SRR16295784 | Other | lineage2.2.1 | None | SRR16295788 | Other | lineage2.2.1 | None | SRR16295780 | Other | lineage2.2.1 | None | SRR16295789 | Other | lineage2.2.1 | None | SRR16295797 | Other | lineage2.2.1 | None | SRR16295801 | Other | lineage2.2.1 | None | SRR16295799 | Other | lineage2.2.1 | None | SRR16295792 | Other | lineage2.2.1 | None | SRR16295795 | Sensitive | lineage2.2.1 | None | SRR16295804 | Other | lineage2.2.1 | None | SRR16295793 | Other | lineage2.2.1 | None | SRR16295798 | Other | lineage2.2.1 | None | SRR16295811 | Other | lineage2.2.1 | None | SRR16295808 | Other | lineage2.2.1 | None | SRR16295809 | Other | lineage2.2.1 | None | SRR16295805 | Other | lineage2.2.1 | None | SRR16295806 | Other | lineage2.2.1 | None | SRR16295819 | Other | lineage2.2.1 | None | SRR16295822 | Other | lineage2.2.1 | None | SRR16295812 | Other | lineage2.2.1 | None | SRR16295826 | Other | lineage2.2.1 | None | SRR16295829 | Other | lineage2.2.1 | None | SRR16295807 | Other | lineage2.2.1 | None | SRR16295816 | Other | lineage2.2.1 | None | SRR16295817 | Other | lineage2.2.1 | None | SRR16295810 | Other | lineage2.2.1 | None | SRR16295813 | Other | lineage2.2.1 | None | SRR16295820 | Other | lineage2.2.1 | None | SRR16295830 | Other | lineage2.2.1 | None | SRR16295831 | Other | lineage2.2.1 | None | SRR16295824 | Other | lineage2.2.1 | None | SRR16295814 | Other | lineage2.2.1 | None | SRR16295827 | Sensitive | lineage2.2.1 | None | SRR16295815 | Sensitive | lineage2.2.1 | None | SRR16295821 | Other | lineage2.2.1 | None | SRR16295828 | Other | lineage2.2.1 | None | SRR16295825 | Other | lineage2.2.1 | None | SRR16295823 | Sensitive | lineage2.2.1 | None | SRR2101540 | Sensitive | lineage4.3.2.1 | None | SRR2100759 | Sensitive | lineage4.6.3 | None | SRR1792265 | Other | La1.8.1 | None | SRR18149455 | Sensitive | lineage4.1.2.1 | None | SRR21714038 | Sensitive | lineage4.3.3 | None | SRR21657198 | HR-TB | lineage4.3.3 | None | SRR5067471 | Sensitive | lineage2.2.1 | None | ERR4816283 | Other | lineage4.1.2.1 | None | ERR245662 | Sensitive | lineage1.2.2.1 | None | ERR8025568 | Pre-XDR-TB | lineage2.2.2 | None | ERR2229540 | Other | lineage4.8 | None | SRR3675571 | HR-TB | None | ERR2514196 | Sensitive | lineage4.3.4.2.1 | gb | SRR5341460 | Other | lineage3 | None | SRR5341288 | Pre-XDR-TB | lineage3 | None | ERR266541 | Sensitive | lineage4.6.3 | None | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | ERR2179797 | Other | lineage4.2.1.1 | cn | SRR6046397 | Other | None | ERR2843440 | Other | lineage1.1.1 | None | ERR5311076 | Other | La1.8.1 | None | ERR2843439 | Other | lineage1.1.1 | None | ERR4829955 | MDR-TB | lineage3 | pk | ERR4828585 | Other | lineage1.1.1 | vn | ERR4828524 | Other | lineage1.1.1 | vn | SRR6981948 | Sensitive | lineage4.3.2.1 | None | ERR294266 | HR-TB | None | ERR5087707 | Other | La1.8.1 | None | ERR4187645 | Other | La1.8.1 | None | ERR5311088 | Other | La1.8.1 | None | ERR10762317 | Pre-XDR-TB | lineage4.2.1 | None | ERR3797007 | Other | La1.8.1 | None | ERR5311086 | Sensitive | lineage4.9;La1.8.1 | None | SRR8600071 | Other | La1.8.1 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3439443 | Other | La1.8.1 | None | ERR3797013 | Other | La1.8.1 | None | ERR3797043 | HR-TB | None | ERR4187636 | Other | La1.8.1 | None | ERR4188160 | Other | La1.8.1 | None | ERR4187869 | Other | La1.8.1 | None | ERR4187916 | Other | La1.8.1 | None | ERR4187993 | Other | La1.8.1 | None | ERR4188080 | Other | La1.8.1 | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR4188187 | Other | La1.8.1 | None | ERR4188254 | Other | La1.8.1 | None | ERR4407529 | Sensitive | lineage4.8 | None | ERR4769525 | Sensitive | lineage4.9 | None | ERR4627379 | Other | La1.8.1 | None | ERR4769482 | Sensitive | La1 | None | ERR4769505 | Other | lineage4.9 | None | ERR4769478 | Other | La1.2 | None | ERR4798139 | Sensitive | lineage1.1.2 | None | ERR736879 | Sensitive | lineage1.1.3.2 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None |
|---|
