EBG00000313339 - n.2938C>T


Drug resistance types
16 Sensitive 7 RR-TB 1 HR-TB 5 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 89 Other
lineage Counts
lineage Count
lineage2.2.1.1 4
La1.8.1 14
lineage2.2.1 79
lineage1.2.2.1 1
lineage4.2;lineage4.9 2
lineage4.9 3
lineage4.3.3 2
lineage1.1.1 4
lineage4.1.2.1.1 1
lineage4.3.2.1 2
lineage4.3.4.2.1 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.1.2.1 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.2;lineage4.8.1;lineage4.9 1
La1.2 1
lineage4.2.1 1
La1.4 1
spoligotype Counts
spoligotype Count
None 120
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1181091 Other lineage2.2.1.1 None
SRR7240350 Other La1.8.1 None
ERR3797007 Other La1.8.1 None
SRR16295784 Other lineage2.2.1 None
ERR245662 Sensitive lineage1.2.2.1 None
ERR4188160 Other La1.8.1 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR16295779 Other lineage2.2.1 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR16295760 Other lineage2.2.1 None
ERR5311076 Other La1.8.1 None
SRR16295767 Other lineage2.2.1 None
SRR1180172 RR-TB lineage2.2.1 None
SRR16295761 Other lineage2.2.1 None
SRR16295797 Other lineage2.2.1 None
SRR16295790 Other lineage2.2.1 None
SRR16295737 Other lineage2.2.1 None
ERR5311086 Sensitive lineage4.9 None
SRR16295742 Other lineage2.2.1 None
SRR16295753 Other lineage2.2.1 None
SRR16295809 Other lineage2.2.1 None
SRR16295788 Other lineage2.2.1 None
SRR16295748 Other lineage2.2.1 None
SRR16295813 Other lineage2.2.1 None
SRR16295828 Other lineage2.2.1 None
SRR16295764 Other lineage2.2.1 None
SRR21657198 HR-TB lineage4.3.3 None
ERR4187916 Other La1.8.1 None
SRR16295808 Other lineage2.2.1 None
SRR16295771 Other lineage2.2.1 None
SRR5067471 Sensitive lineage2.2.1 None
ERR5311088 Sensitive La1.8.1 None
SRR8600071 Other La1.8.1 None
SRR16295770 Other lineage2.2.1 None
ERR4188213 Other La1.8.1 None
ERR4828524 Other lineage1.1.1 vn
ERR4188187 Sensitive La1.8.1 None
SRR16295822 Other lineage2.2.1 None
ERR760877 MDR-TB lineage4.1.2.1.1 None
SRR16295798 Other lineage2.2.1 None
SRR16295762 Other lineage2.2.1 None
ERR3797013 Other La1.8.1 None
SRR16295812 Other lineage2.2.1 None
SRR16295816 Other lineage2.2.1 None
SRR16295821 Other lineage2.2.1 None
SRR6981948 Sensitive lineage4.3.2.1 None
SRR16295765 Other lineage2.2.1 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR4188254 Other La1.8.1 None
SRR1792265 Other La1.8.1 None
SRR16295739 Other lineage2.2.1 None
SRR16295775 Other lineage2.2.1 None
SRR16295743 Other lineage2.2.1 None
SRR16295741 Other lineage2.2.1 None
SRR16295734 Sensitive lineage2.2.1 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
SRR16295769 Other lineage2.2.1 None
SRR16295752 Other lineage2.2.1 None
SRR16295738 Other lineage2.2.1 None
SRR16295772 Other lineage2.2.1 None
SRR2101540 Sensitive lineage4.3.2.1 None
SRR16295773 Other lineage2.2.1 None
ERR4769482 Sensitive lineage4.9 None
SRR16295746 Other lineage2.2.1 None
SRR16295744 Other lineage2.2.1 None
SRR16295811 Other lineage2.2.1 None
ERR4819876 Other lineage4.3.4.2.1 None
ERR4769525 Sensitive lineage4.9 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR16295740 Other lineage2.2.1 None
SRR18149455 Sensitive lineage4.1.2.1 None
SRR16295754 Other lineage2.2.1 None
SRR16295751 Other lineage2.2.1 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
SRR16295766 Other lineage2.2.1 None
SRR16295776 Other lineage2.2.1 None
SRR16295806 Other lineage2.2.1 None
SRR16295782 Other lineage2.2.1 None
SRR16295757 Other lineage2.2.1 None
ERR4187993 Sensitive La1.8.1 None
SRR21714038 Sensitive lineage4.3.3 None
ERR4828585 Other lineage1.1.1 vn
SRR16295791 Other lineage2.2.1 None
SRR16295799 Other lineage2.2.1 None
SRR16295804 Other lineage2.2.1 None
SRR16295793 Other lineage2.2.1 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR16295830 Other lineage2.2.1 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR16295817 Other lineage2.2.1 None
SRR1183144 RR-TB lineage2.2.1 None
SRR16295815 Sensitive lineage2.2.1 None
SRR16295789 Sensitive lineage2.2.1 None
SRR16295792 Other lineage2.2.1 None
SRR16295825 Other lineage2.2.1 None
SRR26399602 Sensitive lineage2.2.1 None
SRR16295749 Other lineage2.2.1 None
SRR11871419 Pre-XDR-TB lineage2.2.1 None
ERR2843440 Other lineage1.1.1 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR16295745 Other lineage2.2.1 None
ERR2843439 Other lineage1.1.1 None
SRR7236233 Other La1.8.1 None
SRR16295750 Other lineage2.2.1 None
SRR16295826 Other lineage2.2.1 None
SRR16295801 Other lineage2.2.1 None
ERR4769478 Other La1.2 None
SRR16295780 Other lineage2.2.1 None
SRR16295824 Other lineage2.2.1 None
SRR16295777 Other lineage2.2.1 None
SRR16295820 Other lineage2.2.1 None
SRR16295763 Other lineage2.2.1 None
SRR16295819 Other lineage2.2.1 None
ERR10762317 Pre-XDR-TB lineage4.2.1 None
SRR16295807 Other lineage2.2.1 None
SRR16295786 Other lineage2.2.1 None
SRR16295810 Other lineage2.2.1 None
SRR16278273 Other La1.4 None
SRR16295747 Other lineage2.2.1 None
SRR16295829 Other lineage2.2.1 None