lineage | Count |
---|---|
lineage2.2.1 | 4 |
lineage2.2.1.1 | 3 |
65 | |
lineage4.3.4.1 | 1 |
lineage4.5 | 1 |
lineage6.3;lineage2.2.1 | 1 |
lineage4.3 | 1 |
lineage2.2 | 1 |
lineage4.1.3 | 3 |
lineage4.9 | 1 |
lineage4.2.1.1 | 1 |
La1.8.1 | 1 |
lineage4.8 | 1 |
La3 | 1 |
lineage4.1.2.1 | 2 |
lineage4.4.1.1 | 1 |
spoligotype | Count |
---|---|
None | 88 |
ID | Drug resistance | Lineage | Country iso2 | SRR1183144 | Other | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR14782211 | Pre-XDR-TB | lineage2.2.1 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR15368973 | Other | None | SRR24061590 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303884 | HR-TB | None | ERR1035239 | HR-TB | None | SRR6325445 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR161033 | HR-TB | None | ERR212121 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR176751 | HR-TB | None | SRR3675545 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675234 | Other | None | ERR176643 | HR-TB | None | ERR212001 | HR-TB | None | SRR3675558 | HR-TB | None | SRR3675574 | HR-TB | None | ERR2693230 | Other | None | ERR2693239 | HR-TB | None | SRR3675571 | HR-TB | None | ERR2693231 | Other | None | SRR23311072 | MDR-TB | lineage2.2 | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6045526 | HR-TB | None | ERR2679247 | RR-TB | lineage4.1.3 | None | ERR2693232 | Other | lineage4.9 | None | SRR6325444 | HR-TB | None | ERR4830353 | Other | None | SRR6045327 | HR-TB | None | SRR6046225 | HR-TB | None | ERR278594 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6325448 | HR-TB | None | ERR294248 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR6832623 | Other | lineage4.2.1.1 | None | ERR294266 | HR-TB | None | ERR323036 | HR-TB | None | ERR323055 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323038 | HR-TB | None | ERR323041 | HR-TB | None | ERR5162044 | Other | La1.8.1 | None | ERR3283027 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283024 | Other | None | ERR323063 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3797014 | Other | None | ERR3445503 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797044 | Other | None | ERR3797017 | Other | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3797061 | Other | None | ERR3797069 | Other | None | ERR4811142 | MDR-TB | None | ERR4132448 | Sensitive | lineage4.8 | None | ERR4188350 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811022 | HR-TB | None | ERR6358837 | HR-TB | None | ERR702404 | HR-TB | None | ERR736835 | HR-TB | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR8976043 | HR-TB | None | SRR1169249 | Other | La3 | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1169306 | Other | None | SRR1173629 | Other | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None |
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