Rv0006 - c.1275C>G


Drug resistance types
5 Sensitive 4 RR-TB 39 HR-TB 16 MDR-TB 2 Pre-XDR-TB 2 XDR-TB 76 Other
lineage Counts
lineage Count
lineage2.1;lineage4.9 5
M.canetti;lineage2.1;lineage4.9 2
lineage4.9 21
lineage2.2.1 9
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.2.2 1
La3;lineage4.9 7
lineage3 1
La1;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
La3;M.canetti;lineage2.1;lineage4.9 12
lineage2.1;lineage4.9;lineage6.3 3
lineage2.2.1.1 3
La1.2 1
La3;M.canetti;lineage3.1 1
10
lineage4.1;lineage4.8 1
lineage4.1.1.3;lineage4.9 1
lineage4.9;lineage6.3 6
La3;M.canetti;lineage4.9 2
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage2 1
lineage4.3.4.2.1 1
lineage2.1 4
La3;lineage2.2.1 1
La3;lineage2.1;lineage4.9 3
La3;M.canetti;lineage2.1;lineage3.1 1
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage4 2
lineage2.2 2
lineage4.6.3;lineage4.9 1
M.canetti;lineage4.9 1
lineage4.6.2.2 2
lineage4.1.1.1 1
La3 1
lineage4.3.3 2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
M.canetti;lineage2.2 2
La1.7;M.canetti;lineage4.9 1
La3;M.canetti;lineage4.8;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;lineage1.1.2 1
lineage2.2.1;lineage6.3 1
lineage4.2.2.2 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage1.2.2.2 1
lineage4.1.1.3 1
lineage3.1 1
lineage5.1.4 1
lineage4.1.2.1 2
lineage2.2.2;lineage4 1
La3;lineage4.8 1
spoligotype Counts
spoligotype Count
None 144
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797083 RR-TB lineage4.9 None
SRR6046046 Other lineage4.9 None
SRR20969731 Other lineage2.2.1 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR18910194 HR-TB lineage2.2.2 None
SRR1169306 Other La3;lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR990545 Other lineage3 None
SRR23961542 Other La1;lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR29017461 Other La3;lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR23961549 Other La1.2 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR9786843 Other None
ERR11252612 Other La3;lineage4.9 None
SRR6789621 Other lineage4.9 None
ERR502908 HR-TB lineage2.2.1 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1173778 Other lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR11252736 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR20969677 HR-TB La3;lineage2 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR1710057 Other lineage2.1 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045053 Other lineage4 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR176793 Other lineage4.1.1.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR28119777 Other lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
SRR3675229 Sensitive lineage4.9 None
SRR1172817 Other La3 None
SRR1180172 Other lineage2.2.1 None
ERR176751 Other lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR6831950 Sensitive lineage4.3.3 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR1184381 MDR-TB None
ERR212001 HR-TB None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR1173633 Other lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR21732980 Other lineage4.3.3 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR1196583 Other lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR29016780 Other lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR18003019 Other lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3416776 Other lineage2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR1184312 Other lineage2.2.1 None
SRR5341330 Other lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR2027263 Other lineage4 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR2513470 Other lineage4.2.2.2 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR6789626 Other None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1196546 Other lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR400336 Sensitive lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
ERR11465025 Other lineage4.1.1.3 None
SRR1165699 Other lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR176643 Other La3;lineage4.9 None
SRR1173400 Other lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR1184294 Other lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR2513283 Sensitive lineage5.1.4 None
SRR7131023 Other lineage4.1.2.1 None
ERR2514692 Other None
SRR1172857 Other None
SRR28119805 Other lineage4.9 None
ERR234659 Other None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR1184372 MDR-TB None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR3675232 Other lineage4.1.2.1 None
ERR4407463 HR-TB None
SRR1172951 Other lineage4.9 None
SRR1196768 MDR-TB None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None