Rv0001 - c.540C>T
Drug resistance types
3 Sensitive
1 RR-TB
6 HR-TB
0 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
5 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 3 |
| lineage4.9;lineage6.3 | 1 |
| lineage4 | 1 |
| La1;lineage4.9 | 1 |
| lineage1.2.1.2 | 1 |
| lineage2.2 | 1 |
| lineage1.2.2.2 | 3 |
| lineage4.2.2.2 | 2 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 15 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2446566 | Other | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR6045053 | Other | lineage4 | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR6152816 | Sensitive | lineage1.2.1.2 | ca | SRR6045548 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SAMN02599081 | HR-TB | lineage1.2.2.2 | in | ERR11044870 | Sensitive | lineage4.2.2.2 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR1173178 | HR-TB | lineage1.2.2.2 | None | ERR11049227 | Sensitive | lineage4.2.2.2 | None | SRR1173043 | HR-TB | lineage1.2.2.2 | None | SRR1180172 | RR-TB | lineage2.2.1 | None |
|---|
