Rv3794 - c.1665T>C
Drug resistance types
35 Sensitive
3 RR-TB
77 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
38 Other
lineage Counts
| lineage | Count |
|---|---|
| 85 | |
| lineage3;lineage2.1 | 1 |
| lineage4.3 | 1 |
| lineage4 | 24 |
| lineage4.1.1.3 | 1 |
| lineage4.3.4.1 | 17 |
| lineage4.1.2.1 | 4 |
| lineage3 | 1 |
| lineage4.4.1.1.1 | 1 |
| La2 | 1 |
| lineage3.1 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.1.3 | 2 |
| La1 | 1 |
| lineage2.2 | 1 |
| lineage6.1.3 | 1 |
| lineage6 | 1 |
| lineage6.3.1 | 1 |
| lineage2.2.1.1 | 4 |
| lineage4.9 | 1 |
| lineage2.2.1 | 3 |
| lineage4.1 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 156 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR161033 | HR-TB | None | SRR3675222 | Other | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675221 | HR-TB | None | SRR3675234 | Other | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675545 | HR-TB | None | ERR4816466 | HR-TB | None | ERR212033 | HR-TB | None | ERR212123 | Other | None | ERR212121 | HR-TB | None | SRR5341373 | HR-TB | lineage4 | None | SRR3675571 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4816656 | HR-TB | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | ERR1193698 | HR-TB | lineage4.3.4.1 | do | SRR5341308 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | ERR4820075 | Other | lineage4.1.2.1 | None | SRR5341469 | Other | lineage4 | None | SRR5341333 | HR-TB | None | SRR5341456 | Other | None | ERR4821655 | Sensitive | lineage4 | None | ERR2693231 | Other | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6045519 | HR-TB | None | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | ERR2693230 | Other | None | SRR6045555 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046299 | HR-TB | None | ERR278594 | HR-TB | None | ERR2516139 | Sensitive | lineage4.3.4.1 | es | SRR6046482 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046397 | Other | None | SRR6046644 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6855869 | HR-TB | lineage4.4.1.1.1 | None | ERR323036 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR294266 | HR-TB | None | ERR294248 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR7535082 | Sensitive | lineage4 | None | ERR5311099 | HR-TB | None | ERR502532 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311090 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323041 | HR-TB | None | ERR323038 | HR-TB | None | ERR3797014 | Other | None | ERR323053 | HR-TB | None | ERR323063 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR137286 | Sensitive | lineage4 | None | ERR3283024 | Other | None | ERR3283036 | HR-TB | None | ERR323043 | HR-TB | None | ERR323055 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR133825 | Sensitive | lineage4 | None | ERR3283032 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3797061 | Other | None | ERR3797043 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797044 | Other | None | ERR3797017 | Other | None | ERR4195355 | Sensitive | lineage4.3.4.1 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4811105 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6358991 | HR-TB | None | ERR5336148 | Other | None | ERR6358837 | HR-TB | None | ERR736865 | HR-TB | None | ERR736839 | Other | None | ERR736834 | Sensitive | lineage4 | None | ERR736835 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | SRR18914177 | Sensitive | lineage4.3.4.1 | None | ERR751326 | Sensitive | lineage4 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9121672 | Sensitive | lineage4.3.4.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9786843 | Other | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9787165 | Other | lineage6 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172310 | HR-TB | None | SRR1169194 | Other | None | SRR1169306 | Other | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1173568 | Other | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1174897 | HR-TB | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1196546 | HR-TB | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR11972241 | Sensitive | None | SRR12416824 | HR-TB | None | SRR14164661 | Sensitive | lineage4.3.4.1 | None | SRR16089632 | RR-TB | lineage4.3.4.1 | None | SRR19303884 | HR-TB | None | SRR24827296 | RR-TB | lineage4.3.4.1 | None | SRR19304036 | HR-TB | None | SRR21685244 | Sensitive | lineage4.3.4.1 | None | SRR19324983 | Sensitive | lineage4.3.4.1 | None | SRR21675451 | MDR-TB | lineage4.3.4.1 | None | SRR21677626 | Sensitive | lineage4.3.4.1 | None | SRR19325579 | Sensitive | lineage4.3.4.1 | None | SRR21659829 | Sensitive | lineage4.3.4.1 | None | SRR21722048 | Sensitive | lineage4.3.4.1 | None | SRR21685116 | Sensitive | lineage4.3.4.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR26112447 | Sensitive | lineage4.3.4.1 | None | ERR176751 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR1035239 | HR-TB | None |
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