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SRA data
Rv3794
- c.1665T>C
Drug resistance types
27 Sensitive
4 RR-TB
40 HR-TB
14 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
21 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.3.4.1
23
lineage4.9
9
La3;M.canetti;lineage2.1;lineage4.9
9
lineage2.2.1.1
4
M.canetti;lineage2.1;lineage4.9
4
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
4
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
3
lineage4.6.2.2
2
lineage2.2.1
2
lineage4.2;lineage4.8.1;lineage4.9
2
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
106
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR038268
HR-TB
La3;M.canetti;lineage4.8;lineage4.9
None
ERR1035122
Sensitive
lineage4.9
None
ERR1063856
HR-TB
M.canetti;lineage4.9;lineage9
None
ERR11252599
Other
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3
None
ERR1193698
HR-TB
lineage4.3.4.1
do
ERR124636
Sensitive
lineage4.9
None
ERR124642
MDR-TB
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
None
ERR124651
MDR-TB
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
None
ERR124652
HR-TB
La3;M.canetti;lineage2.1;lineage4.9
None
ERR126600
HR-TB
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
None
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