lineage | Count |
---|---|
lineage2.2.1 | 4 |
La1.7;lineage4.9 | 6 |
lineage4.9 | 16 |
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
La2;lineage4.9 | 1 |
lineage3 | 1 |
La1.7;lineage3.1;lineage4 | 1 |
lineage4.1.1.3 | 1 |
M.canetti;lineage4.9 | 2 |
lineage1.1.3.1 | 1 |
lineage4.3.3 | 1 |
lineage2.2.1.1 | 4 |
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
La1.7;M.canetti;lineage4.9 | 2 |
lineage2.2 | 1 |
lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
La1.7;lineage4.9;lineage7 | 3 |
La2;lineage2.2 | 1 |
M.canetti;lineage2.1;lineage4.9 | 1 |
lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
spoligotype | Count |
---|---|
None | 51 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR10808668 | Sensitive | lineage2.2.1 | None |
SRR3675385 | Other | La1.7;lineage4.9 | None |
ERR9119669 | HR-TB | lineage4.9 | None |
ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None |
ERR6866410 | Sensitive | lineage4.9 | None |
ERR1063857 | MDR-TB | La2;lineage4.9 | None |
SRR29097004 | Other | lineage3 | None |
ERR4769521 | RR-TB | lineage4.9 | None |
ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None |
SRR10808399 | Sensitive | lineage4.9 | None |
SRR6789624 | HR-TB | lineage4.1.1.3 | None |
SRR29096659 | Sensitive | lineage4.9 | None |
SRR29096387 | Sensitive | M.canetti;lineage4.9 | None |
SRR29096179 | Sensitive | lineage4.9 | None |
ERR8479578 | Sensitive | lineage1.1.3.1 | None |
SRR3675441 | Other | lineage4.9 | None |
ERR3797047 | MDR-TB | lineage4.9 | None |
SRR11972367 | Sensitive | lineage2.2.1 | None |
ERR779852 | Sensitive | lineage4.9 | None |
SRR6045892 | Sensitive | lineage4.9 | None |
ERR4813861 | Other | lineage4.3.3 | None |
SRR1183106 | RR-TB | lineage2.2.1.1 | None |
SRR3675568 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None |
ERR2693252 | Sensitive | lineage4.9 | None |
SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None |
SRR5341373 | Other | lineage4.9 | None |
ERR4810624 | MDR-TB | lineage2.2 | None |
ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None |
ERR1063839 | MDR-TB | La2;lineage2.2 | None |
SRR3675501 | Other | La1.7;lineage4.9 | None |
SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None |
SRR14801759 | HR-TB | La1.7;lineage4.9 | None |
SRR3675267 | Other | La1.7;lineage4.9 | None |
ERR4821655 | HR-TB | lineage4.9 | None |
SRR29096879 | Sensitive | lineage4.9 | None |
ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None |
ERR1023525 | HR-TB | La1.7;lineage4.9 | None |
ERR3283021 | HR-TB | lineage4.9 | None |
SRR3675464 | HR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None |
SRR1181091 | Other | lineage2.2.1.1 | None |
SRR1180172 | Other | lineage2.2.1 | None |
SRR1184024 | RR-TB | lineage2.2.1.1 | None |
SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None |
SRR1180147 | Other | lineage2.2.1.1 | None |
SRR1183144 | Other | lineage2.2.1 | None |
ERR3283025 | MDR-TB | La1.7;lineage4.9 | None |
SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None |
SRR3675487 | Other | M.canetti;lineage4.9 | None |
SRR3675558 | HR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None |
ERR6866807 | Other | lineage4.9 | None |