Rv3596c - c.1377A>T
Drug resistance types
14 Sensitive
3 RR-TB
13 HR-TB
6 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
15 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 5 |
| lineage4.9 | 16 |
| M.canetti;lineage4.9 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.3.3 | 1 |
| La1.7;lineage4.9 | 6 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| La2;lineage2.2 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| lineage2.2.1.1 | 4 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage3 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.1.1.3 | 1 |
| La2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 51 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10808668 | Sensitive | lineage2.2.1 | None | ERR3283021 | HR-TB | lineage4.9 | None | SRR29096387 | Sensitive | M.canetti;lineage4.9 | None | SRR29096179 | Sensitive | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR3675441 | Other | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | ERR4813861 | Other | lineage4.3.3 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR3675568 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR4821655 | HR-TB | lineage4.9 | None | SRR29096879 | Sensitive | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR4810624 | HR-TB | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4.9 | None | SRR3675464 | HR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR3675558 | HR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | ERR6866807 | Other | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | SRR29097004 | Other | lineage3 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR29096659 | Sensitive | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR3675487 | Other | M.canetti;lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None |
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