Rv3596c - c.1377A>T
Drug resistance types
14 Sensitive
3 RR-TB
12 HR-TB
7 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
15 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 4 |
| La1.7;lineage4.9 | 6 |
| lineage4.9 | 16 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| La2;lineage4.9 | 1 |
| lineage3 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage4.1.1.3 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.3.3 | 1 |
| lineage2.2.1.1 | 4 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage2.2 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| La2;lineage2.2 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 51 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR10808668 | Sensitive | lineage2.2.1 | None |
| SRR3675385 | Other | La1.7;lineage4.9 | None |
| ERR9119669 | HR-TB | lineage4.9 | None |
| ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None |
| ERR6866410 | Sensitive | lineage4.9 | None |
| ERR1063857 | MDR-TB | La2;lineage4.9 | None |
| SRR29097004 | Other | lineage3 | None |
| ERR4769521 | RR-TB | lineage4.9 | None |
| ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None |
| SRR10808399 | Sensitive | lineage4.9 | None |
| SRR6789624 | HR-TB | lineage4.1.1.3 | None |
| SRR29096659 | Sensitive | lineage4.9 | None |
| SRR29096387 | Sensitive | M.canetti;lineage4.9 | None |
| SRR29096179 | Sensitive | lineage4.9 | None |
| ERR8479578 | Sensitive | lineage1.1.3.1 | None |
| SRR3675441 | Other | lineage4.9 | None |
| ERR3797047 | MDR-TB | lineage4.9 | None |
| SRR11972367 | Sensitive | lineage2.2.1 | None |
| ERR779852 | Sensitive | lineage4.9 | None |
| SRR6045892 | Sensitive | lineage4.9 | None |
| ERR4813861 | Other | lineage4.3.3 | None |
| SRR1183106 | RR-TB | lineage2.2.1.1 | None |
| SRR3675568 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None |
| ERR2693252 | Sensitive | lineage4.9 | None |
| SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None |
| SRR5341373 | Other | lineage4.9 | None |
| ERR4810624 | MDR-TB | lineage2.2 | None |
| ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
| SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None |
| ERR1063839 | MDR-TB | La2;lineage2.2 | None |
| SRR3675501 | Other | La1.7;lineage4.9 | None |
| SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None |
| SRR14801759 | HR-TB | La1.7;lineage4.9 | None |
| SRR3675267 | Other | La1.7;lineage4.9 | None |
| ERR4821655 | HR-TB | lineage4.9 | None |
| SRR29096879 | Sensitive | lineage4.9 | None |
| ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None |
| ERR1023525 | HR-TB | La1.7;lineage4.9 | None |
| ERR3283021 | HR-TB | lineage4.9 | None |
| SRR3675464 | HR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None |
| SRR1181091 | Other | lineage2.2.1.1 | None |
| SRR1180172 | Other | lineage2.2.1 | None |
| SRR1184024 | RR-TB | lineage2.2.1.1 | None |
| SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None |
| SRR1180147 | Other | lineage2.2.1.1 | None |
| SRR1183144 | Other | lineage2.2.1 | None |
| ERR3283025 | MDR-TB | La1.7;lineage4.9 | None |
| SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None |
| SRR3675487 | Other | M.canetti;lineage4.9 | None |
| SRR3675558 | HR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None |
| ERR6866807 | Other | lineage4.9 | None |
