Rv0001 - c.1180C>T


Drug resistance types
4 Sensitive 2 RR-TB 9 HR-TB 5 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 2 Other
lineage Counts
lineage Count
lineage2.2.1 1
lineage4.9 6
lineage2.2.1.1 2
La1.2.BCG 1
1
lineage4.3.2;lineage4.9 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage3.1.2.2 1
M.canetti;lineage4.9 1
lineage4.2;lineage4.8.1;lineage4.9 1
lineage4.2;lineage4.9 3
lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.9 1
La1.7.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 22
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1180172 Other lineage2.2.1 None
ERR13267386 Sensitive lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
ERR4798262 HR-TB La1.2.BCG None
ERR987722 MDR-TB None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
DRR188649 Sensitive lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR3283018 HR-TB lineage4.9 None
ERR4822368 MDR-TB lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
DRR130158 MDR-TB lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
DRR188665 Sensitive lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None