Rv0001 - c.1180C>T
Drug resistance types
5 Sensitive
2 RR-TB
8 HR-TB
6 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
2 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.2.1 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| lineage4.9 | 8 |
| lineage2.2.1.1 | 2 |
| lineage4.2;lineage4.9 | 3 |
| lineage2.2.1 | 1 |
| 1 | |
| lineage4.3.2;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage3.1.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 23 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR987729 | HR-TB | lineage3.1.2.1 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR4822368 | MDR-TB | lineage4.9 | None | DRR188665 | Sensitive | lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | DRR130158 | MDR-TB | lineage4.9 | None | ERR13246461 | Sensitive | lineage4.9 | None | DRR188649 | Sensitive | lineage4.9 | None | ERR987722 | MDR-TB | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR13254254 | MDR-TB | lineage4.9 | None | ERR13267386 | Sensitive | lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None |
|---|
