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SRA data
Rv0006
- c.1884C>T
Drug resistance types
4 Sensitive
2 RR-TB
4 HR-TB
1 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
7 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
5
lineage4.3.4.1
4
lineage2.2.1.1
3
M.canetti;lineage2.2.2;lineage6.2
2
M.canetti;lineage4.2;lineage4.9
1
lineage4.4.1.2;lineage4.5
1
La1.7;lineage4.9
1
lineage4.3
1
Showing 1 to 8 of 8 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
18
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1873492
HR-TB
M.canetti;lineage2.2.2;lineage6.2
None
ERR4831546
HR-TB
M.canetti;lineage2.2.2;lineage6.2
None
SRR10809129
Sensitive
lineage4.4.1.2;lineage4.5
None
SRR10851668
Sensitive
lineage4.3.4.1
None
SRR10851682
Other
lineage4.3.4.1
None
SRR1180147
Other
lineage2.2.1.1
None
SRR1180172
Other
lineage2.2.1
None
SRR1180270
Other
lineage2.2.1
None
SRR1183106
RR-TB
lineage2.2.1.1
None
SRR1183144
Other
lineage2.2.1
None
Showing 1 to 10 of 18 entries
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