Rv0635 - c.-81C>T
Drug resistance types
0 Sensitive
5 RR-TB
24 HR-TB
25 MDR-TB
1 Pre-XDR-TB
2 XDR-TB
43 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| 11 | |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 3 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 9 |
| lineage2.1;lineage4.9 | 7 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage6.3 | 1 |
| lineage2.1 | 1 |
| lineage4.9;lineage6.3 | 4 |
| La1.2.BCG;La1.8.1 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| lineage4.9 | 8 |
| M.canetti;lineage2.1;lineage6.3 | 2 |
| lineage2.2.1.1 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 3 |
| La3;lineage4.9 | 3 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| La3;lineage2.2.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.2.1 | 2 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage2.2 | 2 |
| La3;lineage4.8 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| lineage1.1.2 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage3 | 2 |
| La1;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 3 |
| La3;lineage1.1.2 | 1 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| lineage3.1 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| La3;lineage2 | 1 |
| La3 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 100 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675568 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR9117709 | Other | None | SRR7535086 | Other | None | ERR4816999 | Other | None | SRR6325445 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR702406 | Other | lineage2.1 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | SRR1184294 | Other | lineage4.9 | None | ERR176751 | HR-TB | lineage4.9 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675450 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR26937071 | MDR-TB | La3;lineage2.2.1 | None | ERR126608 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675515 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1180172 | RR-TB | lineage2.2.1 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR234659 | HR-TB | None | SRR18213713 | HR-TB | None | SRR25827682 | Other | None | ERR212001 | HR-TB | None | SRR3675236 | Other | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR4817893 | Other | La3;lineage4.8 | None | ERR8976043 | MDR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR6325448 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR990545 | RR-TB | lineage3 | None | SRR23961542 | Other | La1;lineage4.9 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045526 | Other | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR1165699 | Other | lineage4.9 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675508 | MDR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR736863 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR1184381 | MDR-TB | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR1184372 | MDR-TB | None | SRR28119805 | Other | lineage4.9 | None | SRR1196768 | MDR-TB | None | SRR1196583 | Other | lineage4.9 | None | ERR4800341 | HR-TB | lineage3 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | SRR5341333 | HR-TB | lineage2.1;lineage4.9 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR038268 | MDR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1173400 | Other | lineage4.9 | None | SRR6325442 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR126600 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR1172817 | Other | La3 | None | SRR3675320 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | None | SRR1183144 | RR-TB | lineage2.2.1 | None |
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