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SRA data
Rv1854c
- c.1044G>A
Drug resistance types
11 Sensitive
4 RR-TB
4 HR-TB
8 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
15 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.1.2.1
11
lineage4.9
5
lineage2.2.1.1
4
lineage2.2.1
3
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
2
M.canetti;lineage4.6.4;lineage4.9
1
M.canetti;lineage4.2;lineage4.9
1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
1
La3;M.canetti;lineage2;lineage4.2;lineage4.3
1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
42
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11043305
Sensitive
lineage4.1.2.1
None
ERR11043379
Sensitive
lineage4.1.2.1
None
ERR11043616
Sensitive
lineage4.1.2.1
None
ERR11080990
Sensitive
lineage4.1.2.1
None
ERR11082775
Sensitive
lineage4.1.2.1
None
ERR13264837
Sensitive
lineage4.1.2.1
None
ERR133986
Other
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
None
ERR158583
MDR-TB
La3;M.canetti;lineage2;lineage4.2;lineage4.3
None
ERR3797036
HR-TB
lineage2.1;lineage4.1.4;lineage4.9
None
ERR403298
MDR-TB
M.canetti;lineage4.2
None
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