Rv1221 - c.259C>T
Drug resistance types
4 Sensitive
1 RR-TB
3 HR-TB
10 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
5 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1 | 4 |
| lineage2.2.2 | 1 |
| lineage3.1.2.2 | 1 |
| La1;lineage4.9 | 1 |
| lineage2.2.2;lineage4.5 | 2 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage4.9 | 3 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La2;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage2.2.2;lineage4.4.2 | 1 |
| La1.7;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 24 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4800027 | Pre-XDR-TB | lineage2.2.1 | in | SRR15368757 | Sensitive | lineage2.2.2 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR15368753 | Other | lineage2.2.2;lineage4.5 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR2693252 | HR-TB | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR4810817 | Sensitive | lineage2.2.1 | cn | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR15368825 | Other | lineage2.2.2;lineage4.5 | None | ERR736856 | HR-TB | lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR15369025 | Sensitive | lineage2.2.2;lineage4.4.2 | None | SRR1180172 | RR-TB | lineage2.2.1 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR23691351 | Sensitive | lineage2.2.1 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None |
|---|
