lineage | Count |
---|---|
lineage4.3.2 | 1 |
66 | |
lineage4 | 7 |
lineage4.3.4 | 1 |
lineage2.2.2 | 2 |
lineage2.2.1 | 5 |
lineage4.1.2.1 | 3 |
lineage2 | 1 |
lineage4.4.1.1 | 1 |
lineage2.2 | 2 |
lineage2.2.1.1 | 2 |
lineage4.9 | 6 |
lineage4.5 | 2 |
lineage4.1 | 1 |
lineage4.3 | 1 |
lineage1.1 | 1 |
lineage3.1 | 2 |
lineage4.3.4.2.1 | 1 |
La1.8.1 | 1 |
lineage3.1.2 | 1 |
spoligotype | Count |
---|---|
None | 107 |
ID | Drug resistance | Lineage | Country iso2 | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR736835 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR6358837 | HR-TB | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736865 | HR-TB | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR8976043 | HR-TB | None | ERR9786843 | Other | None | SRR1167384 | Other | lineage4 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR069989 | HR-TB | lineage2 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1169306 | Other | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR13861439 | RR-TB | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | SRR13861434 | RR-TB | lineage4.9 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR14782405 | HR-TB | None | SRR1640750 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675222 | Other | None | ERR161033 | HR-TB | None | ERR212034 | HR-TB | None | ERR176643 | HR-TB | None | ERR176740 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675545 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675383 | HR-TB | None | SRR5341400 | HR-TB | lineage4 | None | ERR212121 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | SRR3675558 | HR-TB | None | ERR4816466 | HR-TB | None | SRR5341313 | HR-TB | None | SRR5341432 | HR-TB | lineage4 | None | SRR6045519 | HR-TB | None | ERR2693239 | HR-TB | None | SRR5535933 | HR-TB | None | SRR5341315 | Sensitive | None | SRR6045217 | Other | lineage4 | None | ERR4827609 | Sensitive | lineage4.5 | None | SRR6045952 | HR-TB | None | ERR278594 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6046397 | Other | None | SRR6325444 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046644 | HR-TB | None | ERR4830353 | Other | None | SRR6325447 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR3077978 | Other | lineage1.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR294248 | HR-TB | None | ERR323036 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323038 | HR-TB | None | ERR323041 | HR-TB | None | ERR323039 | HR-TB | None | ERR1034652 | Other | None | ERR323045 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR5311090 | HR-TB | None | ERR323055 | HR-TB | None | ERR323053 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797043 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR3797083 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None |
---|