EBG00000313325 - n.1317C>G


Drug resistance types
6 Sensitive 0 RR-TB 57 HR-TB 18 MDR-TB 34 Pre-XDR-TB 0 XDR-TB 9 Other
lineage Counts
lineage Count
lineage4.9 10
lineage2.2.1 29
lineage4.3.3 1
lineage5.1.1 1
lineage2.2 23
lineage4.4.2 5
lineage2.2.2 19
lineage3 4
lineage2.2.1.1 2
11
lineage4 4
lineage4;lineage2.2.2 1
lineage2.2.2;lineage2.2.1 2
lineage4.5 3
lineage4.9;lineage2 1
lineage4.6.1 1
lineage4.6.1.1 2
lineage1.1.2 3
lineage4.1.2.1 1
La1.8.1 1
spoligotype Counts
spoligotype Count
None 124
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR473279 Other lineage4.9 None
ERR773806 Sensitive lineage2.2.1 None
ERR5908229 Sensitive lineage4.3.3 None
ERR751317 Sensitive lineage4.9 None
ERR751338 Other lineage5.1.1 None
SRR1013554 Pre-XDR-TB lineage2.2 None
SRR1013553 Pre-XDR-TB lineage2.2 None
SRR1013565 Pre-XDR-TB lineage4.4.2 None
SRR1013567 Pre-XDR-TB lineage2.2.2 None
SRR1013566 Pre-XDR-TB lineage4.4.2 None
SRR1013568 Pre-XDR-TB lineage2.2 None
SRR1013570 Pre-XDR-TB lineage2.2.1 None
SRR1013569 Pre-XDR-TB lineage2.2.1 None
SRR1013578 MDR-TB lineage2.2 None
SRR1013581 Pre-XDR-TB lineage2.2 None
SRR1013577 MDR-TB lineage2.2 None
SRR1013582 Pre-XDR-TB lineage2.2.1 None
SRR1013583 HR-TB lineage2.2 None
SRR1013590 HR-TB lineage2.2.1 None
SRR1013584 HR-TB lineage2.2 None
SRR1013589 HR-TB lineage2.2.1 None
SRR1013595 HR-TB lineage3 None
SRR1013596 HR-TB lineage3 None
SRR1013600 HR-TB lineage2.2.1.1 None
SRR1013597 HR-TB lineage2.2 None
SRR1013598 HR-TB None
SRR1013599 HR-TB None
SRR1013601 HR-TB lineage2.2.1 None
SRR1013603 HR-TB lineage2.2.1 None
SRR1013607 HR-TB lineage2.2 None
SRR1013604 HR-TB lineage2.2.1 None
SRR1013608 HR-TB lineage2.2 None
SRR1013602 HR-TB lineage2.2.1 None
SRR1013614 HR-TB lineage2.2 None
SRR1013609 HR-TB lineage4 None
SRR1013610 HR-TB lineage4 None
SRR1013613 HR-TB lineage2.2.1 None
SRR1013612 HR-TB lineage4 None
SRR1013611 HR-TB lineage4 None
SRR1013617 MDR-TB None
SRR1013621 Pre-XDR-TB lineage2.2 None
SRR1013618 MDR-TB None
SRR1013629 Pre-XDR-TB lineage2.2 None
SRR1013622 Pre-XDR-TB lineage2.2 None
SRR1013633 MDR-TB lineage2.2 None
SRR1013630 Pre-XDR-TB lineage2.2 None
SRR1047996 MDR-TB lineage2.2.2 None
SRR1013634 MDR-TB lineage2.2 None
SRR1048865 Pre-XDR-TB lineage4.4.2 None
SRR1048852 Pre-XDR-TB lineage4.9 None
SRR1048867 Pre-XDR-TB lineage2.2.2 None
SRR1047993 HR-TB lineage2.2.1 None
SRR1048853 Pre-XDR-TB lineage4;lineage2.2.2 None
SRR1048868 Pre-XDR-TB lineage2.2.2 None
SRR1048866 Pre-XDR-TB lineage4.4.2 None
SRR1048870 Pre-XDR-TB lineage2.2 None
SRR1048869 Pre-XDR-TB lineage2.2.2 None
SRR1048885 MDR-TB None
SRR1048965 Pre-XDR-TB lineage2.2.1 None
SRR1048886 MDR-TB lineage2.2 None
SRR1048966 Pre-XDR-TB lineage2.2.1 None
SRR1048968 HR-TB lineage2.2.2;lineage2.2.1 None
SRR1048974 HR-TB lineage2.2.1 None
SRR1048980 HR-TB lineage3 None
SRR1048975 HR-TB lineage2.2.1 None
SRR1048969 MDR-TB lineage2.2.2 None
SRR1048985 HR-TB lineage2.2.1 None
SRR1048982 HR-TB None
SRR1048983 HR-TB None
SRR1048986 HR-TB lineage2.2.1 None
SRR1048988 HR-TB lineage2.2 None
SRR1048993 HR-TB lineage4.9 None
SRR1048992 HR-TB lineage2.2.2 None
SRR1048995 HR-TB lineage4.5 None
SRR1048994 HR-TB lineage4.9 None
SRR1048996 HR-TB lineage4.5 None
SRR1048998 HR-TB lineage2.2.1 None
SRR1048997 HR-TB lineage2.2.1 None
SRR1049005 MDR-TB lineage2.2.2 None
SRR1049004 MDR-TB lineage2.2.2 None
SRR1048991 HR-TB lineage2.2.2 None
SRR1049007 Pre-XDR-TB lineage2.2.2 None
SRR1049006 MDR-TB lineage2.2.2 None
SRR1049026 Pre-XDR-TB None
SRR1049022 HR-TB lineage4.9;lineage2 None
SRR1049023 HR-TB lineage2.2 None
SRR1049041 MDR-TB None
SRR1049027 Pre-XDR-TB None
SRR1049040 MDR-TB lineage2.2.1 None
SRR1062937 HR-TB lineage4.6.1 None
SRR1062895 Other lineage4.6.1.1 None
SRR1062933 Sensitive lineage4.9 None
SRR1144744 HR-TB lineage2.2.1 None
SRR1140586 HR-TB lineage4.9 None
SRR1144809 HR-TB lineage2.2.1 None
SRR1144759 MDR-TB lineage2.2 None
SRR1172045 Sensitive lineage4.9 None
SRR1173720 Other lineage4.9 None
SRR1173566 Other lineage1.1.2 None
SRR1173416 Other lineage4.9 None
SRR1174291 HR-TB lineage1.1.2 None
SAMN02381005 Other lineage4.6.1.1 None
SRR19303792 Sensitive lineage4.1.2.1 None
SAMN02360583 HR-TB lineage2.2.2 None
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
SAMN02360581 HR-TB lineage2.2.1 None
SAMN02360556 Pre-XDR-TB lineage2.2.2 None
SAMN02360571 HR-TB lineage2.2.2;lineage2.2.1 None
ERR192070 Other None
SAMN02360586 HR-TB lineage2.2.1 None
SAMN02360590 MDR-TB lineage2.2.2 None
SAMN02360577 HR-TB lineage3 None
SAMN02360562 Pre-XDR-TB lineage4.4.2 None
SAMN02360574 HR-TB lineage2.2.1 None
SAMN02398710 MDR-TB lineage2.2.2 None
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
SAMN02360580 HR-TB lineage2.2.1 None
SAMN02360563 Pre-XDR-TB lineage2.2.2 None
SAMN02598978 HR-TB lineage1.1.2 None
SAMN02360564 Pre-XDR-TB lineage2.2.1 None
SAMN02360585 HR-TB lineage4.5 None
SRR5382721 Other La1.8.1 None
SAMN02360579 HR-TB lineage2.2.1.1 None