EBG00000313325 - n.1402C>T
Drug resistance types
0 Sensitive
1 RR-TB
2 HR-TB
41 MDR-TB
48 Pre-XDR-TB
0 XDR-TB
3 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 26 |
| lineage4.3.3 | 10 |
| lineage2.2.1 | 31 |
| lineage2.2.2 | 8 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.9 | 4 |
| lineage4.9;lineage3.1 | 1 |
| lineage4.2.2.2 | 2 |
| 2 | |
| lineage4.1.1.3 | 1 |
| lineage4.1.4 | 1 |
| lineage4.2.1;lineage2.2.1 | 1 |
| lineage4.1.2 | 3 |
| lineage4.3.1 | 1 |
| lineage4.1.2.1 | 3 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 95 |
Geographic prevalence
Country level data for this variant is available for 23 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR5864896 | Pre-XDR-TB | lineage4.8 | None | ERR4830480 | MDR-TB | lineage4.8 | za | ERR8665878 | MDR-TB | lineage4.3.3 | None | ERR5864894 | Pre-XDR-TB | lineage4.8 | None | ERR5864892 | Pre-XDR-TB | lineage4.8 | None | ERR5864893 | Pre-XDR-TB | lineage4.8 | None | ERR5864899 | Pre-XDR-TB | lineage4.8 | None | ERR5864891 | Pre-XDR-TB | lineage4.8 | None | ERR5864895 | Pre-XDR-TB | lineage4.8 | None | ERR5864900 | Pre-XDR-TB | lineage4.8 | None | ERR5864897 | Pre-XDR-TB | lineage4.8 | None | ERR5866472 | MDR-TB | lineage2.2.1 | None | ERR5865923 | MDR-TB | lineage2.2.1 | None | ERR5864901 | Pre-XDR-TB | lineage4.8 | None | ERR5864898 | Pre-XDR-TB | lineage4.8 | None | ERR5987411 | Pre-XDR-TB | lineage4.3.3 | None | ERR5866470 | MDR-TB | lineage2.2.1 | None | ERR5866471 | MDR-TB | lineage2.2.1 | None | SRR24256255 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315476 | MDR-TB | lineage4.8 | None | SRR10315474 | MDR-TB | lineage4.8 | None | ERR8665712 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665713 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119877 | Pre-XDR-TB | lineage4.3.3 | None | SRR11567806 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315475 | MDR-TB | lineage4.8 | None | SRR1367225 | Pre-XDR-TB | lineage2.2.1 | None | SRR1368335 | Pre-XDR-TB | lineage2.2.1 | None | SRR15723024 | Pre-XDR-TB | lineage2.2.2 | None | SRR13870387 | Pre-XDR-TB | lineage4.3.3 | None | SRR15723011 | Pre-XDR-TB | lineage2.2.2 | None | SRR20139557 | MDR-TB | lineage4.8 | None | SRR15723125 | Pre-XDR-TB | lineage2.2.2 | None | SRR18593216 | Pre-XDR-TB | lineage4;lineage1.1.2 | None | ERR11081612 | MDR-TB | lineage2.2.1 | None | ERR11082132 | MDR-TB | lineage2.2.1 | None | ERR11081709 | MDR-TB | lineage2.2.1 | None | SRR21776294 | MDR-TB | lineage4.3.3 | None | SRR23861909 | Pre-XDR-TB | lineage4.8 | None | SRR21159786 | Other | lineage4.9 | None | ERR8025588 | Pre-XDR-TB | lineage2.2.2 | None | ERR190340 | HR-TB | lineage4.9;lineage3.1 | None | ERR1465842 | MDR-TB | lineage4.8 | None | SRR3742668 | Pre-XDR-TB | lineage2.2.1 | None | SRR671824 | Pre-XDR-TB | lineage2.2.2 | cn | ERR1465967 | MDR-TB | lineage4.8 | None | ERR2229093 | HR-TB | lineage4.8 | None | SRR5341254 | Other | lineage4.2.2.2 | in | SRR5152927 | Pre-XDR-TB | lineage4.8 | None | ERR7911073 | Pre-XDR-TB | lineage4.3.3 | za | ERR552274 | MDR-TB | lineage2.2.1 | uz | SAMEA2534652 | MDR-TB | lineage4.8 | uz | ERR7911033 | MDR-TB | lineage2.2.1 | md | SRR5485424 | Other | None | ERR1873448 | Pre-XDR-TB | lineage4.1.1.3 | za | SAMEA2533433 | MDR-TB | lineage2.2.1 | uz | SAMEA2533723 | MDR-TB | lineage4.8 | uz | SAMEA2533615 | MDR-TB | lineage2.2.1 | uz | SRR1710076 | Pre-XDR-TB | lineage2.2.2 | cn | SAMEA4041329 | MDR-TB | lineage4.8 | None | ERR067679 | MDR-TB | lineage4.3.3 | ru | SRR5266555 | MDR-TB | lineage4.3.3 | ru | ERR4827691 | MDR-TB | lineage2.2.1 | None | SRR7341638 | MDR-TB | lineage4.8 | ro | ERR4822359 | Pre-XDR-TB | lineage4.9 | None | ERR4822347 | RR-TB | lineage2.2.1 | None | ERR4822351 | MDR-TB | lineage2.2.1 | None | ERR2516266 | MDR-TB | lineage4.3.3 | be | SRR6485120 | MDR-TB | lineage2.2.1 | None | ERR2516434 | MDR-TB | lineage4.1.4 | pe | ERR234583 | MDR-TB | lineage4.2.1;lineage2.2.1 | ru | ERR4828807 | Pre-XDR-TB | lineage4.1.2 | None | SRR6356937 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830684 | Pre-XDR-TB | lineage4.3.3 | dz | ERR4829671 | MDR-TB | lineage4.3.1 | it | ERR4831002 | Pre-XDR-TB | lineage4.2.2.2 | np | ERR2510683 | Pre-XDR-TB | lineage4.1.2 | it | SRR9971337 | MDR-TB | lineage4.8 | None | DRR130140 | MDR-TB | lineage2.2.1 | None | SRR7652971 | MDR-TB | lineage2.2.1 | None | ERR11488930 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR7829587 | Pre-XDR-TB | lineage4.1.2 | None | DRR130118 | Pre-XDR-TB | lineage4.9 | None | SRR7516327 | MDR-TB | lineage2.2.1 | None | DRR130119 | MDR-TB | lineage2.2.1 | None | DRR130242 | MDR-TB | lineage4.9 | None | ERR11798553 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748258 | Pre-XDR-TB | lineage2.2.2 | None | ERR11488912 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR10762287 | MDR-TB | lineage2.2.1 | None | ERR11488357 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR2515333 | Pre-XDR-TB | lineage2.2.1 | za | ERR8975519 | Pre-XDR-TB | lineage2.2.2 | None | ERR4553882 | Pre-XDR-TB | None | SRR16088263 | MDR-TB | lineage2.2.1 | None |
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