EBG00000313325 - n.513C>T


Drug resistance types
0 Sensitive 3 RR-TB 13 HR-TB 61 MDR-TB 7 Pre-XDR-TB 0 XDR-TB 1 Other
lineage Counts
lineage Count
lineage1.1.2;lineage2.2.1 1
lineage2.2.1;lineage3.1.3 1
lineage4.3.4.2.1 12
lineage4.3.4.2 13
lineage2.2.1 15
lineage4.1.1 14
lineage4.1.1;lineage4.1.2.1;lineage4.3.4.2 1
lineage4.1.2.1 6
lineage4.6.2.2 2
lineage1.1.3.2;lineage4.3.4.2.1 1
lineage1.2.2.2 4
lineage4.3.3 1
lineage4.3.1 1
lineage4.6.1.2 2
lineage4.9 2
lineage1.1.3.3 1
lineage1.1.2 4
lineage4.7;lineage4.8 1
lineage4.7 1
1
lineage4.4.1.1 1
spoligotype Counts
spoligotype Count
None 85
Geographic prevalence
Country level data for this variant is available for 34 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR212098 HR-TB lineage1.1.2;lineage2.2.1 mw
SRR1172895 Pre-XDR-TB lineage2.2.1;lineage3.1.3 None
ERR181861 MDR-TB lineage4.3.4.2.1 mw
ERR1193877 MDR-TB lineage4.3.4.2 sl
ERR1063848 MDR-TB lineage4.3.4.2.1 None
ERR4831843 MDR-TB lineage2.2.1 vn
SRR1165499 MDR-TB lineage2.2.1 None
SRR28394138 MDR-TB lineage4.1.1 None
SRR28393663 MDR-TB lineage4.1.1;lineage4.1.2.1;lineage4.3.4.2 None
ERR6866906 HR-TB lineage4.1.2.1 None
ERR10680192 MDR-TB lineage4.3.4.2 None
ERR036188 MDR-TB lineage4.3.4.2.1 mw
SRR1167134 MDR-TB lineage2.2.1 None
ERR7339135 MDR-TB lineage2.2.1 None
ERR552979 MDR-TB lineage4.3.4.2 None
ERR10680006 MDR-TB lineage4.3.4.2 None
ERR4872062 MDR-TB lineage4.6.2.2 None
ERR176616 MDR-TB lineage1.1.3.2;lineage4.3.4.2.1 mw
SRR1166819 MDR-TB lineage2.2.1 None
ERR221618 MDR-TB lineage4.3.4.2.1 mw
ERR7821118 HR-TB lineage1.2.2.2 None
ERR037486 MDR-TB lineage4.3.4.2.1 mw
ERR10680219 RR-TB lineage4.1.2.1 None
ERR551513 MDR-TB lineage4.3.4.2 None
ERR10680037 MDR-TB lineage4.3.4.2 None
ERR2516499 Pre-XDR-TB lineage4.1.1 pe
SRR12420433 MDR-TB lineage2.2.1 None
ERR176629 MDR-TB lineage4.3.4.2.1 mw
SRR6485007 Pre-XDR-TB lineage4.3.3 None
SRR28393580 MDR-TB lineage4.1.1 None
ERR4829923 HR-TB lineage4.3.1 it
ERR190370 MDR-TB lineage4.3.4.2.1 mw
ERR4827583 MDR-TB lineage2.2.1 None
ERR2706948 MDR-TB lineage4.6.1.2 cd
ERR11488435 MDR-TB lineage1.2.2.2 None
ERR2707175 MDR-TB lineage4.9 cd
ERR1199111 MDR-TB lineage4.6.1.2 cd
ERR4821182 HR-TB lineage1.1.3.3 gb
ERR181907 HR-TB lineage1.1.2 mw
ERR10680028 RR-TB lineage4.1.2.1 None
SRR21798451 Pre-XDR-TB lineage4.7;lineage4.8 None
ERR163958 MDR-TB lineage4.3.4.2.1 mw
DRR130207 Pre-XDR-TB lineage2.2.1 None
ERR10680033 RR-TB lineage4.1.2.1 None
SAMN02414950 MDR-TB lineage2.2.1 se
ERR4813123 Pre-XDR-TB lineage4.1.1 None
SRR23071987 Other lineage4.9 None
ERR2516702 MDR-TB lineage2.2.1 pe
ERR212008 HR-TB lineage4.3.4.2.1 mw
ERR6358850 MDR-TB lineage4.7 None
SRR1162842 MDR-TB lineage2.2.1 None
ERR551511 MDR-TB lineage4.3.4.2 None
ERR10680065 MDR-TB lineage4.3.4.2 None
ERR2516733 MDR-TB lineage2.2.1 pe
ERR2516644 MDR-TB lineage2.2.1 pe
SAMEA2533994 MDR-TB lineage4.3.4.2 None
SRR28393357 MDR-TB lineage4.1.1 None
SRR28394069 MDR-TB lineage4.1.1 None
SRR28393310 MDR-TB lineage4.1.1 None
SRR28394050 MDR-TB lineage4.1.1 None
SRR28394261 MDR-TB lineage4.1.1 None
ERR4553413 MDR-TB None
SRR28393693 MDR-TB lineage2.2.1 None
SRR28394204 MDR-TB lineage4.1.1 None
SRR28394037 Pre-XDR-TB lineage4.1.1 None
SRR28394179 MDR-TB lineage4.1.1 None
ERR779849 HR-TB lineage4.1.2.1 pe
ERR2660428 HR-TB lineage1.2.2.2 None
ERR212088 HR-TB lineage1.1.2 mw
ERR212105 HR-TB lineage1.1.2 mw
ERR2516724 MDR-TB lineage4.1.1 pe
ERR4553597 MDR-TB lineage1.2.2.2 None
ERR221616 MDR-TB lineage4.3.4.2.1 mw
ERR551512_ERR551513_ERR551511 MDR-TB lineage4.3.4.2 None
ERR8773904 MDR-TB lineage4.3.4.2 None
SRR26400062 MDR-TB lineage2.2.1 None
ERR190365 HR-TB lineage1.1.2 mw
ERR2510142 HR-TB lineage4.1.2.1 pe
ERR181986 MDR-TB lineage4.3.4.2.1 mw
ERR551512 MDR-TB lineage4.3.4.2 None
ERR10680026 MDR-TB lineage4.3.4.2 None
ERR221617 MDR-TB lineage4.3.4.2.1 mw
ERR2707112 MDR-TB lineage4.4.1.1 cd
ERR2516713 MDR-TB lineage4.1.1 pe
ERR9119470 MDR-TB lineage4.6.2.2 None