EBG00000313339 - n.3053dupC
Drug resistance types
14 Sensitive
3 RR-TB
7 HR-TB
2 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 5 |
| La1.5 | 5 |
| La1.8.1 | 1 |
| lineage2.2.1 | 6 |
| lineage4.3 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage2.2.2 | 1 |
| lineage3;La1.1 | 1 |
| lineage4.5 | 1 |
| lineage4.4.1.1;lineage2.2 | 1 |
| La1.1 | 3 |
| lineage4.4.1.1;lineage2.2.1 | 3 |
| lineage2.2.1.1 | 1 |
| lineage4.1.2.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 33 |
Geographic prevalence
Country level data for this variant is available for 11 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR11049513 | Sensitive | lineage4.8 | None | ERR11044311 | HR-TB | La1.5 | None | ERR5311093 | Other | La1.8.1 | None | SRR10869069 | Sensitive | lineage2.2.1 | None | SRR27107258 | Pre-XDR-TB | lineage4.3 | None | SRR10315635 | RR-TB | lineage2.2.1 | None | SRR10397107 | RR-TB | lineage4.3.4.2 | None | ERR9119398 | HR-TB | lineage2.2.1 | None | SRR16058199 | Sensitive | lineage4.8 | None | SRR22048370 | Other | lineage4.6.2.2 | None | SRR18002950 | MDR-TB | lineage2.2.1 | None | SRR18911980 | Sensitive | lineage2.2.2 | None | SRR6797377 | Other | lineage4.8 | None | ERR11068230 | HR-TB | La1.5 | None | ERR11068156 | HR-TB | La1.5 | None | ERR161071 | Sensitive | lineage3;La1.1 | mw | SRR28239442 | HR-TB | La1.5 | None | SAMEA2533363 | Sensitive | lineage2.2.1 | de | SRR6824360 | MDR-TB | lineage4.5 | cn | SRR4037750 | Sensitive | lineage4.4.1.1;lineage2.2 | za | ERR181980 | Sensitive | La1.1 | mw | SRR4037761 | Sensitive | lineage4.4.1.1;lineage2.2.1 | za | ERR4827516 | Sensitive | lineage4.8 | None | ERR161044 | Sensitive | La1.1 | mw | ERR212091 | Sensitive | La1.1 | mw | SRR6152728 | Other | lineage2.2.1 | ca | ERR4829767 | HR-TB | lineage4.8 | None | SRR4037752 | RR-TB | lineage4.4.1.1;lineage2.2.1 | za | SRR4037751 | Sensitive | lineage4.4.1.1;lineage2.2.1 | za | ERR2815559 | HR-TB | La1.5 | None | ERR10112416 | Other | lineage2.2.1.1 | None | SRR6832648 | Other | lineage4.1.2.1 | None | SRR6832338 | Sensitive | lineage4.1.2.1 | None |
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