EBG00000313339 - n.669T>A
Drug resistance types
6 Sensitive
7 RR-TB
4 HR-TB
4 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
55 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.2.2 | 1 |
| lineage4.3 | 1 |
| lineage2.2.1 | 16 |
| lineage4.8 | 9 |
| lineage4.1.2.1 | 11 |
| lineage6 | 1 |
| lineage3 | 11 |
| lineage4.6.5 | 1 |
| lineage4.3.3 | 4 |
| lineage4.1 | 1 |
| lineage5 | 1 |
| 1 | |
| lineage4.7 | 1 |
| lineage3.1.3 | 1 |
| lineage4.6.2.2 | 3 |
| lineage3.1.2.1 | 1 |
| lineage4.5 | 2 |
| lineage4.1.1.3.1 | 1 |
| lineage4.1.2 | 1 |
| lineage1.1.2 | 2 |
| lineage4.2.2 | 1 |
| lineage3.1.1 | 2 |
| lineage4.9 | 2 |
| lineage4.8.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.2.2.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.1.1 | 1 |
| La1.8.1 | 1 |
| lineage4.3.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 82 |
Geographic prevalence
Country level data for this variant is available for 18 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9117676 | Other | lineage4.2.2.2 | None | ERR9117760 | HR-TB | lineage4.3 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814623 | Other | lineage4.8 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR19304115 | Other | lineage4.1.2.1 | None | ERR4814576 | Sensitive | lineage4.8 | gb | SRR19304094 | Other | lineage6 | None | ERR4815784 | Other | lineage2.2.1 | gb | SRR3675230 | RR-TB | lineage3 | None | ERR4815467 | Other | lineage3 | None | ERR4814745 | Other | lineage4.6.5 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4814952 | Sensitive | lineage3 | None | ERR4815502 | Other | lineage4.1 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4816243 | Sensitive | lineage3 | None | ERR4816300 | Other | lineage4.1.2.1 | None | ERR4817131 | Pre-XDR-TB | None | SRR3675565 | Other | lineage3 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817276 | Other | lineage2.2.1 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4817175 | Other | lineage4.8 | None | ERR4817189 | Other | lineage4.7 | None | ERR4817506 | Sensitive | lineage3 | gb | ERR4819002 | HR-TB | lineage4.8 | None | ERR2513589 | Other | lineage3.1.3 | None | ERR4818724 | Other | lineage4.1.2.1 | gb | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR4818050 | Other | lineage4.6.2.2 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR2513298 | Other | lineage4.8 | gb | ERR4818287 | Other | lineage4.5 | gb | ERR4818393 | RR-TB | lineage3 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR2512884 | Other | lineage4.6.2.2 | gb | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR2513743 | Other | lineage4.1.2 | None | ERR2512941 | Other | lineage1.1.2 | None | ERR4819166 | Other | lineage3 | gb | ERR4820720 | Other | lineage4.1.2.1 | None | ERR4819324 | Other | lineage4.8 | gb | ERR4819576 | Other | lineage4.2.2 | gb | ERR4820746 | RR-TB | lineage3 | None | ERR2513994 | MDR-TB | lineage2.2.1 | gb | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR4819593 | Other | lineage4.5 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4820891 | Other | lineage4.9 | gb | ERR2514668 | Other | lineage4.8.1 | gb | SRR6045516 | Other | lineage3.1.1 | None | SRR6046089 | Other | lineage4.1.2.1 | None | ERR4821769 | Other | lineage4.1.2.1 | None | SRR6045464 | Other | lineage4.1.1.3 | None | ERR4821159 | MDR-TB | lineage4.2.2.1 | gb | ERR4821286 | Other | lineage4.8 | None | ERR4821222 | Other | lineage4.3.2.1 | None | ERR4821906 | Other | lineage4.1.1 | None | ERR4822225 | Sensitive | lineage3 | gb | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6045957 | Other | lineage4.9 | None | SRR6046534 | Other | lineage1.1.2 | None | ERR1194816 | Other | lineage2.2.1 | None | ERR4586795 | Other | La1.8.1 | None | SRR6046343 | Other | lineage2.2.1 | None | ERR4829337 | Other | lineage4.8 | None | SRR6046616 | Other | lineage4.3.1.1 | None |
|---|
