Rv0001 - c.108C>T


Drug resistance types
0 Sensitive 8 RR-TB 14 HR-TB 27 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 25 Other
lineage Counts
lineage Count
lineage4.1.2 68
lineage1.1.1.1 4
lineage4.1.1.1;lineage4.1.2 2
lineage4.1.2;lineage4.3.3 1
lineage4.2.1 1
spoligotype Counts
spoligotype Count
None 76
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR29231333 Other lineage4.1.2 None
SRR13583472 Pre-XDR-TB lineage4.1.2 None
SRR29051239 HR-TB lineage4.1.2 None
SRR26399777 RR-TB lineage1.1.1.1 None
SRR29051585 MDR-TB lineage4.1.2 None
SRR29050868 Other lineage4.1.2 None
SRR29051011 MDR-TB lineage4.1.2 None
SRR29051286 MDR-TB lineage4.1.2 None
SRR29051205 MDR-TB lineage4.1.2 None
SRR29231610 Other lineage4.1.2 None
ERR1034625 Other lineage4.1.1.1;lineage4.1.2 br
SRR29051535 MDR-TB lineage4.1.2 None
SRR29050883 Pre-XDR-TB lineage4.1.2 None
SRR13583397 MDR-TB lineage4.1.2 None
ERR1034620 HR-TB lineage4.1.2 br
SRR13583342 MDR-TB lineage4.1.2 None
SRR13583434 MDR-TB lineage4.1.2 None
SRR13583455 Other lineage4.1.2 None
SRR29051302 MDR-TB lineage4.1.2 None
SRR29051228 Other lineage4.1.2 None
SRR29050680 HR-TB lineage4.1.2 None
ERR9119450 RR-TB lineage1.1.1.1 None
SRR10851606 Other lineage4.1.2 None
SRR10851691 Other lineage4.1.2 None
ERR6544666 HR-TB lineage4.1.2 None
ERR1034631 HR-TB lineage4.1.2 br
ERR6544664 Other lineage4.1.1.1;lineage4.1.2 None
SRR13583446 HR-TB lineage4.1.2 None
ERR1034627 MDR-TB lineage4.1.2 br
SRR29051024 HR-TB lineage4.1.2 None
SRR5067645 RR-TB lineage1.1.1.1 vn
SRR29050712 MDR-TB lineage4.1.2 None
SRR29230822 Other lineage4.1.2 None
SRR10851620 Other lineage4.1.2 None
SRR29050710 MDR-TB lineage4.1.2 None
SRR13583432 MDR-TB lineage4.1.2 None
SRR10851692 Other lineage4.1.2 None
SRR10851672 Other lineage4.1.2 None
SRR29231389 Other lineage4.1.2 None
SRR13583311 Other lineage4.1.2 None
SRR29051516 Other lineage4.1.2 None
SRR13583431 MDR-TB lineage4.1.2 None
SRR13583360 MDR-TB lineage4.1.2 None
ERR4830428 RR-TB lineage1.1.1.1 vn
SRR29050673 Other lineage4.1.2;lineage4.3.3 None
SRR13583353 MDR-TB lineage4.1.2 None
SRR13583369 MDR-TB lineage4.1.2 None
SRR13583402 Other lineage4.1.2 None
SRR29051344 RR-TB lineage4.1.2 None
SRR29051521 HR-TB lineage4.1.2 None
SRR9224928 RR-TB lineage4.1.2 None
SRR29050707 RR-TB lineage4.1.2 None
SRR29051035 Other lineage4.1.2 None
SRR29050678 MDR-TB lineage4.1.2 None
SRR29050896 HR-TB lineage4.1.2 None
SRR9224986 MDR-TB lineage4.1.2 None
SRR29051360 HR-TB lineage4.1.2 None
SRR13583344 RR-TB lineage4.1.2 None
SRR29050704 MDR-TB lineage4.1.2 None
SRR29050875 HR-TB lineage4.1.2 None
SRR29051312 MDR-TB lineage4.1.2 None
SRR13583321 HR-TB lineage4.1.2 None
SRR29230801 Other lineage4.1.2 None
SRR29231362 Other lineage4.1.2 None
ERR4830884 MDR-TB lineage4.2.1 None
SRR29051514 Other lineage4.1.2 None
ERR6544667 MDR-TB lineage4.1.2 None
SRR13583314 HR-TB lineage4.1.2 None
SRR13583340 MDR-TB lineage4.1.2 None
SRR13583509 Other lineage4.1.2 None
SRR29051300 Other lineage4.1.2 None
SRR9224962 Other lineage4.1.2 None
ERR6544665 HR-TB lineage4.1.2 None
SRR29050897 MDR-TB lineage4.1.2 None
SRR9224981 MDR-TB lineage4.1.2 None
SRR29051292 MDR-TB lineage4.1.2 None