lineage | Count |
---|---|
La1.8.1 | 285 |
lineage2.2.1 | 13 |
lineage5.1 | 2 |
lineage1.1.1 | 3 |
lineage4.3.3 | 2 |
lineage4.5 | 1 |
lineage1.1.3.1 | 1 |
lineage4.8 | 1 |
lineage6.3.1 | 1 |
lineage4.1.3 | 1 |
spoligotype | Count |
---|---|
None | 310 |
ID | Drug resistance | Lineage | Country iso2 | ERR3468675 | Other | La1.8.1 | None | ERR3468625 | Other | La1.8.1 | None | ERR4187617 | Other | La1.8.1 | None | ERR4188212 | Other | La1.8.1 | None | ERR4188437 | Other | La1.8.1 | None | ERR13290298 | MDR-TB | lineage2.2.1 | None | ERR4187672 | Other | La1.8.1 | None | ERR5087781 | Other | La1.8.1 | None | ERR4188068 | Other | La1.8.1 | None | ERR4188431 | Other | La1.8.1 | None | ERR4187957 | Other | La1.8.1 | None | ERR4188213 | Other | La1.8.1 | None | ERR3468569 | Other | La1.8.1 | None | ERR4187655 | Other | La1.8.1 | None | ERR4187959 | Other | La1.8.1 | None | ERR4188271 | Other | La1.8.1 | None | ERR5087677 | Other | La1.8.1 | None | ERR5087785 | Other | La1.8.1 | None | ERR5087729 | Other | La1.8.1 | None | ERR4188260 | Other | La1.8.1 | None | ERR5087566 | Other | La1.8.1 | None | ERR5087534 | Other | La1.8.1 | None | ERR3468627 | Other | La1.8.1 | None | ERR3468683 | Sensitive | La1.8.1 | None | SRR1162695 | MDR-TB | lineage2.2.1 | None | ERR5087540 | Other | La1.8.1 | None | ERR5087636 | Other | La1.8.1 | None | ERR4188302 | Other | La1.8.1 | None | ERR3468600 | Other | La1.8.1 | None | ERR5087943 | Other | La1.8.1 | None | ERR4187627 | Other | La1.8.1 | None | ERR5162095 | Other | La1.8.1 | None | ERR4188219 | Other | La1.8.1 | None | ERR4188382 | Other | La1.8.1 | None | ERR4187795 | Other | La1.8.1 | None | SRR21658632 | Sensitive | lineage5.1 | None | ERR4188132 | Other | La1.8.1 | None | ERR3468620 | Other | La1.8.1 | None | ERR5087699 | Other | La1.8.1 | None | ERR3468587 | Other | La1.8.1 | None | ERR4187828 | Other | La1.8.1 | None | SRR30182754 | Sensitive | lineage1.1.1 | None | ERR5087873 | Other | La1.8.1 | None | ERR5087441 | Other | La1.8.1 | None | ERR4187660 | Other | La1.8.1 | None | ERR4187961 | Other | La1.8.1 | None | ERR4187635 | Other | La1.8.1 | None | ERR4187866 | Other | La1.8.1 | None | ERR5087765 | Other | La1.8.1 | None | ERR4188211 | Other | La1.8.1 | None | ERR5162069 | Other | La1.8.1 | None | ERR5162123 | Other | La1.8.1 | None | ERR3468634 | Other | La1.8.1 | None | ERR13290299 | MDR-TB | lineage2.2.1 | None | ERR3468792 | Other | La1.8.1 | None | ERR4830603 | MDR-TB | lineage2.2.1 | tm | ERR3468661 | Other | La1.8.1 | None | ERR4187825 | Other | La1.8.1 | None | ERR4187830 | Other | La1.8.1 | None | ERR4187874 | Other | La1.8.1 | None | ERR4188083 | Other | La1.8.1 | None | ERR5087685 | Other | La1.8.1 | None | ERR4187886 | Other | La1.8.1 | None | ERR4187922 | Other | La1.8.1 | None | ERR4188017 | Other | La1.8.1 | None | ERR4188080 | Other | La1.8.1 | None | ERR3468682 | Other | La1.8.1 | None | SRR1165549 | MDR-TB | lineage2.2.1 | None | ERR4188215 | Other | La1.8.1 | None | ERR4187622 | Other | La1.8.1 | None | ERR4187968 | Other | La1.8.1 | None | ERR4188400 | Other | La1.8.1 | None | ERR4188125 | Other | La1.8.1 | None | ERR4188209 | Other | La1.8.1 | None | ERR5087892 | Other | La1.8.1 | None | ERR3468673 | Other | La1.8.1 | None | ERR4187824 | Other | La1.8.1 | None | ERR4188236 | Other | La1.8.1 | None | ERR5162078 | Other | La1.8.1 | None | ERR11081232 | MDR-TB | lineage4.3.3 | None | ERR4187889 | Other | La1.8.1 | None | ERR4187988 | Other | La1.8.1 | None | SRR1165524 | MDR-TB | lineage2.2.1 | None | ERR4187619 | Other | La1.8.1 | None | ERR4188171 | Other | La1.8.1 | None | ERR4188334 | Other | La1.8.1 | None | ERR3468697 | Other | La1.8.1 | None | ERR4187876 | Other | La1.8.1 | None | ERR5162074 | Sensitive | La1.8.1 | None | ERR4187912 | Other | La1.8.1 | None | ERR3468528 | Other | La1.8.1 | None | ERR5087648 | Other | La1.8.1 | None | ERR5162044 | Other | La1.8.1 | None | ERR3468632 | Other | La1.8.1 | None | ERR5087659 | Other | La1.8.1 | None | ERR5087556 | Other | La1.8.1 | None | ERR4188393 | Other | La1.8.1 | None | ERR4187991 | Other | La1.8.1 | None | ERR3468688 | Other | La1.8.1 | None | SRR8758884 | Pre-XDR-TB | lineage4.5 | None | ERR4188229 | Other | La1.8.1 | None | ERR4187934 | Other | La1.8.1 | None | ERR4188019 | Other | La1.8.1 | None | ERR5087688 | Other | La1.8.1 | None | ERR4187945 | Other | La1.8.1 | None | ERR4188237 | Other | La1.8.1 | None | ERR4187882 | Other | La1.8.1 | None | ERR3468608 | Other | La1.8.1 | None | ERR4188374 | Other | La1.8.1 | None | ERR4627358 | Other | La1.8.1 | None | ERR4188407 | Other | La1.8.1 | None | ERR4187663 | Other | La1.8.1 | None | ERR4188295 | Other | La1.8.1 | None | ERR4188428 | Other | La1.8.1 | None | ERR3468603 | Other | La1.8.1 | None | ERR3468558 | Other | La1.8.1 | None | ERR3468595 | Other | La1.8.1 | None | ERR5162132 | Other | La1.8.1 | None | ERR4187970 | Other | La1.8.1 | None | ERR3468658 | Other | La1.8.1 | None | ERR4188399 | Other | La1.8.1 | None | ERR5162096 | Other | La1.8.1 | None | ERR4187884 | Other | La1.8.1 | None | SRR17688638 | Sensitive | lineage2.2.1 | None | ERR3468793 | Other | La1.8.1 | None | ERR4188233 | Other | La1.8.1 | None | ERR5087700 | Other | La1.8.1 | None | ERR5162047 | Other | La1.8.1 | None | ERR13284789 | MDR-TB | lineage4.3.3 | None | ERR3468576 | Other | La1.8.1 | None | ERR3468610 | Other | La1.8.1 | None | ERR3468765 | Other | La1.8.1 | None | SRR11662202 | MDR-TB | lineage1.1.1 | None | ERR3468529 | Other | La1.8.1 | None | ERR3468536 | Other | La1.8.1 | None | ERR4187798 | Other | La1.8.1 | None | ERR4188022 | Other | La1.8.1 | None | ERR4188398 | Other | La1.8.1 | None | ERR3439537 | Other | La1.8.1 | None | ERR4187820 | Other | La1.8.1 | None | ERR13291195 | Sensitive | lineage5.1 | None | ERR3468709 | Other | La1.8.1 | None | ERR4188037 | Other | La1.8.1 | None | ERR3468537 | Other | La1.8.1 | None | ERR3468735 | Other | La1.8.1 | None | ERR4187986 | Other | La1.8.1 | None | ERR4188190 | Other | La1.8.1 | None | ERR4188341 | Other | La1.8.1 | None | ERR4188380 | Other | La1.8.1 | None | ERR4187637 | Other | La1.8.1 | None | ERR4187896 | Other | La1.8.1 | None | ERR4188362 | Other | La1.8.1 | None | ERR4188391 | Other | La1.8.1 | None | ERR5162082 | Other | La1.8.1 | None | ERR4187946 | Other | La1.8.1 | None | ERR4188249 | Other | La1.8.1 | None | ERR3468699 | Other | La1.8.1 | None | ERR3468710 | Other | La1.8.1 | None | ERR4188402 | Other | La1.8.1 | None | ERR4188246 | Other | La1.8.1 | None | ERR3468723 | Other | La1.8.1 | None | ERR4188065 | Other | La1.8.1 | None | ERR5087452 | Other | La1.8.1 | None | ERR5087913 | Other | La1.8.1 | None | ERR4187827 | Other | La1.8.1 | None | ERR4188053 | Other | La1.8.1 | None | ERR4187953 | Other | La1.8.1 | None | ERR3468617 | Other | La1.8.1 | None | ERR4187792 | Other | La1.8.1 | None | ERR4187822 | Other | La1.8.1 | None | ERR4188201 | Other | La1.8.1 | None | ERR4188430 | Other | La1.8.1 | None | SRR6650206 | HR-TB | lineage1.1.3.1 | None | ERR3468649 | Other | La1.8.1 | None | ERR4188223 | Other | La1.8.1 | None | ERR4187925 | Other | La1.8.1 | None | ERR3468731 | Other | La1.8.1 | None | ERR3468667 | Other | La1.8.1 | None | ERR3468747 | Other | La1.8.1 | None | ERR4188284 | Other | La1.8.1 | None | ERR3468521 | Other | La1.8.1 | None | ERR4187938 | Other | La1.8.1 | None | ERR5087857 | Other | La1.8.1 | None | ERR4188335 | Other | La1.8.1 | None | ERR4188353 | Other | La1.8.1 | None | ERR1023296 | HR-TB | lineage2.2.1 | None | ERR3468571 | Other | La1.8.1 | None | ERR4188252 | Other | La1.8.1 | None | ERR5087549 | Other | La1.8.1 | None | ERR4188204 | Other | La1.8.1 | None | ERR3468635 | Other | La1.8.1 | None | ERR3468652 | Other | La1.8.1 | None | ERR3468691 | Other | La1.8.1 | None | ERR4188337 | Other | La1.8.1 | None | DRR185046 | MDR-TB | lineage2.2.1 | vn | ERR3468570 | Other | La1.8.1 | None | ERR3468706 | Other | La1.8.1 | None | ERR4187706 | Other | La1.8.1 | None | ERR4187818 | Other | La1.8.1 | None | ERR5087787 | Other | La1.8.1 | None | ERR3468681 | Other | La1.8.1 | None | ERR718418 | Sensitive | lineage1.1.1 | th | ERR5087872 | Other | La1.8.1 | None | ERR5162138 | Other | La1.8.1 | None | ERR5162120 | Other | La1.8.1 | None | SAMN02414858 | MDR-TB | lineage2.2.1 | se | ERR5087899 | Other | La1.8.1 | None | ERR4187920 | Other | La1.8.1 | None | ERR3468621 | Other | La1.8.1 | None | ERR3468678 | Other | La1.8.1 | None | ERR4187943 | Other | La1.8.1 | None | ERR3468707 | Other | La1.8.1 | None | ERR3468717 | Other | La1.8.1 | None | ERR4188128 | Other | La1.8.1 | None | ERR5162091 | Other | La1.8.1 | None | ERR4187608 | Other | La1.8.1 | None | ERR5087632 | Other | La1.8.1 | None | ERR5162108 | Other | La1.8.1 | None | ERR4188214 | Other | La1.8.1 | None | ERR4188427 | Other | La1.8.1 | None | ERR4187904 | Other | La1.8.1 | None | ERR5087679 | Other | La1.8.1 | None | ERR3468585 | Other | La1.8.1 | None | ERR3468664 | Other | La1.8.1 | None | ERR4188404 | Other | La1.8.1 | None | ERR3468568 | Other | La1.8.1 | None | ERR4188056 | Other | La1.8.1 | None | ERR4188077 | Other | La1.8.1 | None | ERR5162131 | Other | La1.8.1 | None | ERR3468668 | Other | La1.8.1 | None | ERR5162093 | Other | La1.8.1 | None | ERR5162110 | Other | La1.8.1 | None | ERR5162092 | Other | La1.8.1 | None | SRR1166879 | MDR-TB | lineage2.2.1 | None | ERR4188070 | Other | La1.8.1 | None | ERR3468520 | Other | La1.8.1 | None | ERR3468538 | Other | La1.8.1 | None | ERR3468545 | Other | La1.8.1 | None | ERR3468594 | Other | La1.8.1 | None | SRR18715111 | Pre-XDR-TB | lineage4.8 | None | ERR3468579 | Other | La1.8.1 | None | ERR5087652 | Other | La1.8.1 | None | ERR3468648 | Other | La1.8.1 | None | ERR5087637 | Other | La1.8.1 | None | ERR4188075 | Other | La1.8.1 | None | ERR4188205 | Other | La1.8.1 | None | ERR4187873 | Other | La1.8.1 | None | ERR4188093 | Other | La1.8.1 | None | ERR4188130 | Other | La1.8.1 | None | ERR4188263 | Other | La1.8.1 | None | ERR5087554 | Other | La1.8.1 | None | ERR5087742 | Other | La1.8.1 | None | ERR5162146 | Other | La1.8.1 | None | ERR13290301 | MDR-TB | lineage2.2.1 | None | ERR4188086 | Other | La1.8.1 | None | ERR4188210 | Other | La1.8.1 | None | ERR4188347 | Other | La1.8.1 | None | ERR5162067 | Other | La1.8.1 | None | ERR3468663 | Other | La1.8.1 | None | ERR5087855 | Other | La1.8.1 | None | ERR5087863 | Other | La1.8.1 | None | ERR5087871 | Other | La1.8.1 | None | ERR4187879 | Other | La1.8.1 | None | ERR3468592 | Other | La1.8.1 | None | ERR3439442 | Other | La1.8.1 | None | ERR4627360 | Other | La1.8.1 | None | ERR3468711 | Other | La1.8.1 | None | ERR4188367 | Other | La1.8.1 | None | ERR3170437 | Sensitive | lineage6.3.1 | gh | ERR3468698 | Other | La1.8.1 | None | ERR5087459 | Other | La1.8.1 | None | ERR4188016 | Other | La1.8.1 | None | ERR4188155 | Other | La1.8.1 | None | ERR4188194 | Other | La1.8.1 | None | ERR4188135 | Other | La1.8.1 | None | ERR3468650 | Other | La1.8.1 | None | ERR5087830 | Other | La1.8.1 | None | ERR4187804 | Other | La1.8.1 | None | ERR5087698 | Other | La1.8.1 | None | ERR3468660 | Other | La1.8.1 | None | ERR3468593 | Other | La1.8.1 | None | ERR11082668 | Pre-XDR-TB | lineage4.1.3 | None | ERR4187990 | Other | La1.8.1 | None | ERR3468750 | Other | La1.8.1 | None | ERR3468686 | Other | La1.8.1 | None | ERR4187916 | Other | La1.8.1 | None | ERR5087710 | Other | La1.8.1 | None | ERR4188371 | Other | La1.8.1 | None | ERR4188397 | Other | La1.8.1 | None | ERR3468601 | Other | La1.8.1 | None | ERR3468554 | Other | La1.8.1 | None | ERR3468651 | Sensitive | La1.8.1 | None | ERR4188388 | Other | La1.8.1 | None | ERR5087730 | Other | La1.8.1 | None | SRR17688642 | Sensitive | lineage2.2.1 | None | ERR3468546 | Other | La1.8.1 | None | ERR3468672 | Other | La1.8.1 | None | ERR3468586 | Other | La1.8.1 | None | ERR4187950 | Other | La1.8.1 | None | ERR5087584 | Other | La1.8.1 | None | ERR4187639 | Other | La1.8.1 | None | ERR4187900 | Other | La1.8.1 | None | ERR4187815 | Other | La1.8.1 | None | ERR4187697 | Other | La1.8.1 | None | ERR4187972 | Other | La1.8.1 | None | ERR4188299 | Other | La1.8.1 | None | ERR3468626 | Other | La1.8.1 | None | ERR3468715 | Other | La1.8.1 | None | ERR4187613 | Other | La1.8.1 | None | ERR4187717 | Other | La1.8.1 | None |
---|