lineage | Count |
---|---|
lineage2.2.1.1 | 3 |
lineage4.4.2 | 2 |
lineage4.4.1.1 | 1 |
lineage7 | 1 |
lineage4.3.4.2 | 6 |
lineage3.1.2.1 | 1 |
lineage4.3.3 | 1 |
lineage4.1.1.1 | 1 |
lineage2.2.1 | 8 |
lineage4.8 | 1 |
lineage4.1.2.1 | 2 |
lineage1;lineage2.2.1 | 1 |
lineage4.1.2 | 1 |
lineage4.3.4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 30 |
ID | Drug resistance | Lineage | Country iso2 | ERR3273144 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR9971064 | Other | lineage2.2.1.1 | None | SRR21277271 | MDR-TB | lineage4.4.2 | None | ERR9285926 | Sensitive | lineage4.4.1.1 | None | ERR1200624 | Sensitive | lineage7 | et | SAMN02381050 | HR-TB | lineage4.3.4.2 | ug | ERR4797760 | HR-TB | lineage3.1.2.1 | in | SRR1049750 | HR-TB | lineage4.3.4.2 | None | SRR12416821 | MDR-TB | lineage4.3.3 | None | ERR4818256 | Other | lineage4.1.1.1 | None | SRR1140638 | HR-TB | lineage4.3.4.2 | None | ERR987734 | HR-TB | lineage4.3.4.2 | None | ERR7911418 | MDR-TB | lineage2.2.1 | us | SRR1062940 | HR-TB | lineage4.3.4.2 | None | ERR216923 | HR-TB | lineage4.8 | mw | SRR7341683 | Sensitive | lineage4.1.2.1 | ro | ERR9634302 | Other | lineage1;lineage2.2.1 | None | SRR8237343 | Sensitive | lineage2.2.1 | ke | ERR5866426 | MDR-TB | lineage2.2.1 | None | ERR5864647 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969839 | MDR-TB | lineage2.2.1 | None | SRR21277270 | MDR-TB | lineage4.4.2 | None | ERR5864648 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | ERR5866427 | MDR-TB | lineage2.2.1 | None | SRR1049749 | HR-TB | lineage4.3.4.2 | None | SRR29093867 | HR-TB | lineage4.1.2 | None | ERR036202 | Sensitive | lineage4.3.4.2.1 | mw | ERR8774576 | MDR-TB | lineage2.2.1 | None | ERR11081787 | Pre-XDR-TB | lineage4.1.2.1 | None |
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