lineage | Count |
---|---|
lineage4.2.2.2 | 65 |
lineage2.2.1 | 41 |
lineage4.3.2 | 2 |
lineage4.8 | 4 |
lineage4.5 | 4 |
lineage4.2.2.2;lineage4.8 | 1 |
lineage4.1.2.1 | 2 |
lineage4.2.1 | 12 |
lineage1.1.2;lineage4.4 | 1 |
lineage4.4.1.1 | 1 |
lineage4.2.1.1 | 8 |
lineage1.2.1.2.1 | 4 |
lineage1.2.1.2 | 1 |
lineage1.1.2;lineage4.3.4.2.1;lineage4.4 | 1 |
lineage3 | 1 |
lineage4.2.2 | 1 |
lineage2.2.2 | 1 |
lineage4.3.3 | 1 |
spoligotype | Count |
---|---|
None | 151 |
ID | Drug resistance | Lineage | Country iso2 | ERR13290363 | MDR-TB | lineage4.2.2.2 | None | ERR5864864 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864854 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864857 | Pre-XDR-TB | lineage2.2.1 | None | SRR1146301 | MDR-TB | lineage4.2.2.2 | None | ERR3275385 | MDR-TB | lineage4.2.2.2 | nl | SRR7516344 | Pre-XDR-TB | lineage2.2.1 | None | SRR1144833 | MDR-TB | lineage4.2.2.2 | None | ERR6866938 | Sensitive | lineage4.3.2 | None | ERR1465847 | Sensitive | lineage4.8 | None | SAMN02360549 | Pre-XDR-TB | lineage2.2.1 | kr | DRR188509 | Other | lineage4.5 | None | SRR1144760 | MDR-TB | lineage4.2.2.2 | None | ERR13246210 | Sensitive | lineage4.5 | None | ERR13290487 | MDR-TB | lineage4.2.2.2 | None | ERR13430445 | Pre-XDR-TB | lineage2.2.1 | None | ERR2446468 | MDR-TB | lineage4.2.2.2 | nl | ERR13290365 | MDR-TB | lineage4.2.2.2 | None | ERR4830826 | HR-TB | lineage4.2.2.2;lineage4.8 | et | ERR13261580 | HR-TB | lineage4.1.2.1 | None | ERR551080 | Sensitive | lineage4.2.1 | de | SRR29093553 | MDR-TB | lineage4.2.2.2 | None | ERR10465812 | Sensitive | lineage4.2.1 | None | ERR2515023 | Sensitive | lineage1.1.2;lineage4.4 | gb | ERR5864862 | Pre-XDR-TB | lineage2.2.1 | None | SRR1162874 | MDR-TB | lineage4.2.2.2 | None | ERR551598 | Sensitive | lineage4.2.1 | de | SRR1003100 | MDR-TB | lineage2.2.1 | None | ERR553340 | Sensitive | lineage4.2.1 | de | ERR551273 | Sensitive | lineage4.2.1 | de | ERR13276188 | MDR-TB | lineage4.2.2.2 | None | SAMN02414930 | MDR-TB | lineage4.2.2.2 | se | SRR1048838 | Pre-XDR-TB | lineage2.2.1 | None | ERR6397213 | MDR-TB | lineage4.2.2.2 | None | ERR13290323 | MDR-TB | lineage4.2.2.2 | None | ERR11044060 | MDR-TB | lineage4.2.2.2 | None | SAMN02414874 | MDR-TB | lineage4.2.2.2 | se | DRR474146 | Sensitive | lineage2.2.1 | None | SRR1144808 | MDR-TB | lineage4.2.2.2 | None | ERR4800388 | HR-TB | lineage4.4.1.1 | None | ERR2514615 | Sensitive | lineage4.5 | gb | ERR551282 | Sensitive | lineage4.2.1 | de | SRR1163014 | MDR-TB | lineage4.2.2.2 | None | SRR1162968 | MDR-TB | lineage4.2.2.2 | None | ERR5864860 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044055 | MDR-TB | lineage4.2.2.2 | None | ERR7737675 | MDR-TB | lineage4.2.2.2 | None | ERR4817313 | HR-TB | lineage4.2.1.1 | None | ERR4830824 | Pre-XDR-TB | lineage4.2.2.2 | et | ERR551564 | Sensitive | lineage4.2.1 | de | ERR9125058 | Sensitive | lineage1.2.1.2.1 | None | ERR13290489 | MDR-TB | lineage4.2.2.2 | None | SRR1013540 | Pre-XDR-TB | lineage2.2.1 | None | SRR1144814 | MDR-TB | lineage4.2.2.2 | None | ERR13290362 | MDR-TB | lineage4.2.2.2 | None | ERR13290488 | MDR-TB | lineage4.2.2.2 | None | SRR1144785 | MDR-TB | lineage4.2.2.2 | None | ERR5864865 | Pre-XDR-TB | lineage2.2.1 | None | SRR21690946 | MDR-TB | lineage4.2.2.2 | None | ERR13290327 | MDR-TB | lineage4.2.2.2 | None | ERR4820364 | HR-TB | lineage4.2.1.1 | gb | ERR550692 | Sensitive | lineage4.2.1 | de | ERR550828 | Sensitive | lineage4.2.1 | de | ERR13290326 | MDR-TB | lineage4.2.2.2 | None | SAMN02360548 | Pre-XDR-TB | lineage2.2.1 | kr | ERR4815811 | Other | lineage4.2.1.1 | None | SRR21689464 | Pre-XDR-TB | lineage4.2.2.2 | None | ERR13290757 | Sensitive | lineage1.2.1.2 | None | SRR1003099 | Pre-XDR-TB | lineage2.2.1 | None | SRR1003103 | Pre-XDR-TB | lineage2.2.1 | None | SRR1146293 | MDR-TB | lineage4.2.2.2 | None | ERR2514501 | Sensitive | lineage1.1.2;lineage4.3.4.2.1;lineage4.4 | gb | SAMN02414876 | MDR-TB | lineage4.2.2.2 | se | ERR13290324 | MDR-TB | lineage4.2.2.2 | None | SRR22251900 | Sensitive | lineage1.2.1.2.1 | None | ERR11067246 | MDR-TB | lineage4.2.2.2 | None | SRR1013537 | Pre-XDR-TB | lineage2.2.1 | None | SRR3085317 | MDR-TB | lineage4.2.1.1 | None | ERR7911397 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290322 | MDR-TB | lineage4.2.2.2 | None | ERR13290325 | MDR-TB | lineage4.2.2.2 | None | ERR5864859 | Pre-XDR-TB | lineage2.2.1 | None | SRR1166925 | MDR-TB | lineage4.2.2.2 | None | ERR4829102 | Pre-XDR-TB | lineage4.2.2.2 | dj | SRR1510056 | Sensitive | lineage1.2.1.2.1 | None | SRR16087967 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822497 | MDR-TB | lineage4.2.2.2 | de | ERR7911395 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290328 | MDR-TB | lineage4.2.2.2 | None | ERR7737819 | MDR-TB | lineage4.2.2.2 | None | ERR5864856 | Pre-XDR-TB | lineage2.2.1 | None | ERR978786 | Sensitive | lineage4.8 | gl | ERR551271 | Sensitive | lineage4.8 | de | ERR5979512 | Sensitive | lineage4.1.2.1 | None | SRR1013539 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163093 | MDR-TB | lineage4.2.2.2 | None | SAMN02414873 | MDR-TB | lineage4.2.2.2 | se | ERR7737871 | MDR-TB | lineage4.2.2.2 | None | ERR4828777 | MDR-TB | lineage4.2.1.1 | None | ERR5864851 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163123 | MDR-TB | lineage4.2.2.2 | None | ERR5864853 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864861 | Pre-XDR-TB | lineage2.2.1 | None | ERR4011960 | MDR-TB | lineage4.2.2.2 | None | SRR1162879 | MDR-TB | lineage4.2.2.2 | None | ERR11067956 | Sensitive | lineage3 | None | SRR1013538 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02414887 | MDR-TB | lineage4.2.2.2 | se | ERR4819757 | HR-TB | lineage4.2.1.1 | gb | ERR5864852 | Pre-XDR-TB | lineage2.2.1 | None | SRR1146330 | MDR-TB | lineage4.2.2.2 | None | ERR5864850 | Pre-XDR-TB | lineage2.2.1 | None | ERR10465809 | Sensitive | lineage4.2.1 | None | SRR671832 | Sensitive | lineage4.2.2 | cn | ERR11067339 | Sensitive | lineage1.2.1.2.1 | None | ERR13290329 | MDR-TB | lineage4.2.2.2 | None | ERR5864863 | Pre-XDR-TB | lineage2.2.1 | None | SRR29231203 | Sensitive | lineage4.8 | None | ERR13193998 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02414896 | MDR-TB | lineage4.2.2.2 | se | ERR5864849 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864858 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821291 | HR-TB | lineage4.2.1.1 | gb | SRR1048835 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163128 | MDR-TB | lineage4.2.2.2 | None | SRR1146309 | MDR-TB | lineage4.2.2.2 | None | ERR7911396 | Pre-XDR-TB | lineage2.2.1 | None | ERR13430440 | Pre-XDR-TB | lineage2.2.1 | None | ERR13430444 | Pre-XDR-TB | lineage2.2.1 | None | SRR1146289 | MDR-TB | lineage4.2.2.2 | None | SRR1163085 | MDR-TB | lineage4.2.2.2 | None | SRR1003102 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969446 | Sensitive | lineage4.5 | None | ERR2517379 | MDR-TB | lineage4.2.2.2 | nl | ERR4813329 | Sensitive | lineage4.3.2 | None | SAMN02360622 | Pre-XDR-TB | lineage2.2.1 | kr | SRR1163179 | MDR-TB | lineage4.2.2.2 | None | SAMN02360621 | Pre-XDR-TB | lineage2.2.1 | kr | ERR552995 | Sensitive | lineage4.2.1 | de | ERR4815129 | HR-TB | lineage4.2.1.1 | gb | ERR11044661 | Sensitive | lineage4.2.1 | None | ERR7737647 | MDR-TB | lineage4.2.2.2 | None | ERR3275716 | MDR-TB | lineage4.2.2.2 | nl | SRR1162986 | MDR-TB | lineage4.2.2.2 | None | SRR24710138 | MDR-TB | lineage4.3.3 | None | SRR1048839 | Pre-XDR-TB | lineage2.2.1 | None | SRR1144784 | MDR-TB | lineage4.2.2.2 | None | ERR5864855 | Pre-XDR-TB | lineage2.2.1 | None | ERR3275727 | MDR-TB | lineage4.2.2.2 | nl | SRR1162796 | MDR-TB | lineage4.2.2.2 | None | ERR1023412 | MDR-TB | lineage4.2.2.2 | None |
---|