lineage | Count |
---|---|
lineage2.2.1 | 12 |
lineage1.1.2 | 1 |
lineage4.1.1.1 | 12 |
lineage4.3.2 | 1 |
lineage2.2.1.1 | 1 |
lineage4.5 | 4 |
lineage4.3.4.2 | 3 |
lineage3 | 2 |
lineage4.3.4.2.1 | 2 |
lineage4.1.2.1 | 2 |
lineage4.1.3 | 2 |
lineage4.3.3 | 4 |
lineage4.1.1.3 | 3 |
lineage4.8 | 4 |
lineage1.1.3.3 | 2 |
lineage9 | 1 |
lineage4.1.1.2 | 1 |
spoligotype | Count |
---|---|
None | 57 |
ID | Drug resistance | Lineage | Country iso2 | ERR2510678 | Pre-XDR-TB | lineage2.2.1 | it | SRR11348150 | MDR-TB | lineage1.1.2 | None | ERR551745 | MDR-TB | lineage2.2.1 | None | ERR11465454 | HR-TB | lineage4.1.1.1 | None | ERR552710 | Pre-XDR-TB | lineage4.1.1.1 | sz | ERR552273 | Pre-XDR-TB | lineage4.1.1.1 | sz | ERR2206038 | Sensitive | lineage4.3.2 | None | ERR552456 | Pre-XDR-TB | lineage4.1.1.1 | sz | ERR11465456 | MDR-TB | lineage4.1.1.1 | None | ERR4800375 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR551989 | Other | lineage4.5 | de | ERR2707043 | MDR-TB | lineage4.3.4.2 | cd | ERR11067432 | HR-TB | lineage3 | None | ERR4796962 | Pre-XDR-TB | lineage3 | in | ERR221581 | Sensitive | lineage4.3.4.2.1 | mw | ERR4812098 | Sensitive | lineage4.1.2.1 | None | ERR11081053 | MDR-TB | lineage4.1.3 | None | ERR13288952 | Pre-XDR-TB | lineage2.2.1 | None | ERR11465700 | MDR-TB | lineage4.1.1.1 | None | SRR16370497 | Pre-XDR-TB | lineage4.3.3 | None | ERR2179776 | HR-TB | lineage4.5 | cn | ERR11488957 | MDR-TB | lineage4.1.1.1 | None | SRR29093439 | Sensitive | lineage4.1.1.3 | None | ERR7910863 | Pre-XDR-TB | lineage4.3.3 | pe | SRR16088227 | Sensitive | lineage4.8 | None | ERR228052 | Sensitive | lineage2.2.1 | ru | SRR21691022 | Sensitive | lineage1.1.3.3 | None | SRR28240204 | HR-TB | lineage4.8 | None | ERR11489017 | MDR-TB | lineage4.1.1.1 | None | ERR13286083 | MDR-TB | lineage4.1.1.1 | None | ERR11775711 | Sensitive | lineage4.8 | None | ERR13284011 | MDR-TB | lineage4.1.3 | None | ERR3276009 | Sensitive | lineage1.1.3.3 | nl | ERR3287743 | Sensitive | lineage4.1.1.3 | pe | SRR10869047 | Sensitive | lineage4.1.1.3 | None | SRR20969918 | Sensitive | lineage4.5 | None | DRR474122 | Sensitive | lineage2.2.1 | None | SRR12420631 | HR-TB | lineage2.2.1 | None | SRR29231663 | MDR-TB | lineage4.3.4.2 | None | ERR4024942 | Sensitive | lineage4.3.3 | None | SRR29539547 | Pre-XDR-TB | lineage2.2.1 | None | ERR11049111 | Sensitive | lineage4.1.2.1 | None | ERR551166 | Pre-XDR-TB | lineage4.1.1.1 | sz | SAMEA2534162 | MDR-TB | lineage2.2.1 | uz | SRR14782124 | Other | lineage2.2.1 | None | ERR4423727 | MDR-TB | lineage4.1.1.1 | None | SRR671839 | Pre-XDR-TB | lineage2.2.1 | cn | SRR25786916 | Sensitive | lineage9 | None | ERR11465920 | Other | lineage4.3.4.2.1 | None | ERR551745_ERR551743_ERR551744 | MDR-TB | lineage2.2.1 | None | ERR6865330 | Sensitive | lineage4.3.3 | None | ERR4800166 | Pre-XDR-TB | lineage2.2.1 | None | ERR2707102 | MDR-TB | lineage4.3.4.2 | cd | ERR751922 | HR-TB | lineage4.5 | th | ERR11488712 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR1034973 | HR-TB | lineage4.1.1.2 | za | ERR4820151 | Other | lineage4.8 | None |
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