Rv0005 - c.1642_1644delTTGinsCC
Drug resistance types
0 Sensitive
0 RR-TB
6 HR-TB
1 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
15 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4 | 1 |
| lineage4.9 | 4 |
| lineage4.1.3 | 1 |
| lineage4.1.2.1 | 2 |
| 2 | |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage2.1;lineage4.9 | 1 |
| lineage6.3.1 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| La3;lineage4.9 | 1 |
| lineage2.1;lineage6.3 | 1 |
| lineage2.1 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 23 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR2027263 | Other | lineage4 | None | SRR1165699 | Other | lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9787197 | Other | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR1196583 | Other | lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR3797069 | Other | lineage4.9 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR1184381 | MDR-TB | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None |
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