Rv0005 - c.2017_2019delCTGinsTA
Drug resistance types
0 Sensitive
0 RR-TB
7 HR-TB
1 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
9 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.1.3 | 2 |
| La3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage4.1.1.1 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| 2 | |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 18 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR702406 | Other | lineage2.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR1172817 | Other | La3 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR1184381 | MDR-TB | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR5341333 | HR-TB | lineage2.1;lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | SRR1165699 | Other | lineage4.9 | None | SRR3675236 | Other | None |
|---|
