Rv0005 - p.Asn499Asp
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
0 MDR-TB
81 Pre-XDR-TB
3 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 33 |
| lineage2.2.1 | 15 |
| lineage4 | 15 |
| lineage2.2.1.2 | 3 |
| lineage4.8 | 13 |
| lineage2.2.2 | 5 |
| lineage1.1.3.1;lineage2.2.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.2.2 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.3.2 | 1 |
| lineage4.8.1 | 1 |
| lineage4.4.1.1 | 2 |
| lineage2.2.2;lineage4 | 1 |
| lineage2.2.1;lineage4.3.3 | 1 |
| lineage4.1.1 | 1 |
| lineage4.4.2 | 1 |
| lineage3 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 100 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR22461632 | Pre-XDR-TB | lineage4.3.3 | None | SRR28119759 | Pre-XDR-TB | lineage2.2.1 | None | ERR867550 | Pre-XDR-TB | lineage4.3.3 | None | ERR4813107 | Pre-XDR-TB | lineage4 | None | SRR23340052 | Pre-XDR-TB | lineage4.3.3 | None | SRR1202633 | Other | lineage4 | None | SRR28351164 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR29274159 | Pre-XDR-TB | lineage4.8 | None | SRR28706504 | Pre-XDR-TB | lineage2.2.1 | None | ERR13286035 | Pre-XDR-TB | lineage4.8 | None | SRR10040291 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | SRR1202535 | Other | lineage4 | None | SRR1202534 | Other | lineage4 | None | SRR25827888 | XDR-TB | lineage1.1.3.1;lineage2.2.1 | None | SRR1013629 | Pre-XDR-TB | lineage2.2.2 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR8025596 | Pre-XDR-TB | lineage2.2.2 | None | ERR13245561 | Pre-XDR-TB | lineage4 | None | ERR13261391 | Pre-XDR-TB | lineage4.3.3 | None | SRR27107251 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488943 | Pre-XDR-TB | lineage4.1.2 | None | ERR11488429 | Pre-XDR-TB | lineage4.1.2 | None | ERR7361957 | Pre-XDR-TB | lineage4.3.3 | None | SRR29274149 | Pre-XDR-TB | lineage4.8 | None | SRR23340057 | Pre-XDR-TB | lineage4.3.3 | None | ERR4812330 | Other | lineage4.8 | pe | SRR18715111 | Pre-XDR-TB | lineage4.8 | None | SRR1208253 | Other | lineage4 | None | ERR2516964 | Pre-XDR-TB | lineage4.3.3 | gb | SRR21690918 | Other | lineage4.8 | None | SRR7645858 | Pre-XDR-TB | lineage4.3.3 | None | ERR4800677 | Pre-XDR-TB | lineage4.3.3 | None | SRR671724 | Pre-XDR-TB | lineage2.2.1 | cn | SRR1020009 | Other | lineage4 | None | ERR13284167 | Pre-XDR-TB | lineage4.2.2 | None | ERR1213904 | XDR-TB | lineage4.1.2.1 | pe | ERR4815540 | Pre-XDR-TB | lineage4.3.3 | None | SRR29081607 | Pre-XDR-TB | lineage4.3.2 | None | SRR29274124 | Pre-XDR-TB | lineage4.8 | None | SRR29093938 | Pre-XDR-TB | lineage2.2.2 | None | SRR27107265 | Pre-XDR-TB | lineage4.3.3 | None | ERR9907755 | Pre-XDR-TB | lineage4.8.1 | None | SRR23340053 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488763 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR22175235 | Pre-XDR-TB | lineage2.2.1 | None | SRR1202497 | Other | lineage4 | None | ERR7361961 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488958 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR13289865 | Pre-XDR-TB | lineage4.3.3 | None | ERR4798455 | Pre-XDR-TB | lineage2.2.1.2 | in | SRR10430360 | Pre-XDR-TB | lineage2.2.1 | None | SRR29273842 | Pre-XDR-TB | lineage4.8 | None | SRR1013630 | Pre-XDR-TB | lineage2.2.2;lineage4 | None | SRR6152848 | Other | lineage2.2.1 | ca | ERR4813881 | Pre-XDR-TB | lineage4.3.3 | None | ERR8665941 | Pre-XDR-TB | lineage4.3.3 | None | ERR4813110 | Pre-XDR-TB | lineage4.3.3 | pe | ERR4813112 | Pre-XDR-TB | lineage4.3.3 | pe | ERR8665558 | Pre-XDR-TB | lineage4.3.3 | None | ERR4813111 | Pre-XDR-TB | lineage4.3.3 | pe | ERR8665860 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR9738532 | Pre-XDR-TB | lineage4.8 | None | SRR8847014 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814678 | Pre-XDR-TB | lineage4.3.3 | gb | ERR4818657 | Pre-XDR-TB | lineage4.3.3 | gb | SRR6046680 | Pre-XDR-TB | lineage4.3.3 | gb | SRR1208276 | Other | lineage4 | None | ERR4813203 | Pre-XDR-TB | lineage4 | None | SRR24710243 | Pre-XDR-TB | lineage4.3.3 | None | SRR8847010 | Pre-XDR-TB | lineage2.2.1 | None | SRR23340164 | Pre-XDR-TB | lineage4.3.3 | None | SRR18495624 | Other | lineage4 | None | ERR4799356 | Pre-XDR-TB | lineage2.2.1 | in | ERR4813130 | Pre-XDR-TB | lineage4.3.3 | None | SRR22528526 | Pre-XDR-TB | lineage4.1.1 | None | SRR7652984 | Pre-XDR-TB | lineage4.8 | None | SRR10040424 | Pre-XDR-TB | lineage4.4.2 | None | SRR1208268 | Other | lineage4 | None | SRR25207311 | Pre-XDR-TB | lineage2.2.1 | None | ERR3275760 | Other | lineage4.8 | nl | SRR21887695 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232642 | Pre-XDR-TB | lineage2.2.1 | None | SRR29273634 | Pre-XDR-TB | lineage4.8 | None | ERR13261212 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR3132151 | XDR-TB | lineage4.1.2.1 | None | ERR4797246 | Pre-XDR-TB | lineage3 | in | SRR1208351 | Other | lineage4 | None | SRR13232573 | Pre-XDR-TB | lineage4.3.3 | None | ERR4809351 | Pre-XDR-TB | lineage4.8 | za | ERR8665991 | Pre-XDR-TB | lineage4.3.3 | None | ERR8665940 | Pre-XDR-TB | lineage4.3.3 | None | ERR7911208 | Pre-XDR-TB | lineage4.3.3 | za | SRR5709990 | Pre-XDR-TB | lineage2.2.1 | th | SRR23340071 | Pre-XDR-TB | lineage4.3.3 | None | SRR1202541 | Other | lineage4 | None | ERR13290927 | Pre-XDR-TB | lineage4.5 | None | SRR10303283 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887709 | Pre-XDR-TB | lineage2.2.2 | None | ERR4811137 | Other | lineage4 | cn |
|---|
