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SRA data
Rv0006
- c.1224C>T
Drug resistance types
25 Sensitive
0 RR-TB
10 HR-TB
11 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
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lineage
Count
lineage
Count
lineage1.2.2.2
39
lineage4.9
2
lineage4.2;lineage4.6.3;lineage4.9.1
2
lineage2.2.1
2
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
2
La1.7.1;lineage4.9
1
lineage1.2.2.2;lineage3
1
La1.2.BCG
1
1
lineage4.2;lineage4.6.3;lineage4.9
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
52
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1063859
HR-TB
La1.7.1;lineage4.9
None
ERR11044082
Sensitive
lineage2.2.1
None
ERR11044458
Sensitive
lineage1.2.2.2
None
ERR12544157
Sensitive
lineage1.2.2.2
None
ERR13261085
Sensitive
lineage1.2.2.2
None
ERR13265637
Other
lineage1.2.2.2
None
ERR13266803
MDR-TB
lineage1.2.2.2;lineage3
None
ERR13291295
Sensitive
lineage1.2.2.2
None
ERR13292378
Sensitive
lineage1.2.2.2
None
ERR161037
Other
lineage4.9
None
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