Rv0006 - p.Asp94Cys
Drug resistance types
5 Sensitive
2 RR-TB
0 HR-TB
50 MDR-TB
13 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.1 | 3 |
| lineage4.2.1 | 2 |
| lineage2.2.1 | 25 |
| lineage4.1.2.1 | 3 |
| lineage4 | 4 |
| lineage3 | 6 |
| lineage4.1.1.3 | 2 |
| lineage2.2 | 1 |
| lineage4.1.3 | 1 |
| lineage4.3.3 | 2 |
| lineage4.8 | 2 |
| lineage2.2.2 | 10 |
| lineage4.3.2.1 | 3 |
| lineage4.3.3;lineage2.2.1.1 | 1 |
| lineage3;lineage2.2.1;lineage1.2.2.2 | 1 |
| lineage3;lineage2.2.1 | 2 |
| lineage4.3.2;lineage3;lineage2.2.1 | 1 |
| lineage4.9 | 2 |
| lineage4.5 | 2 |
| lineage1.1.2 | 1 |
| lineage5.1.5 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 76 |
Geographic prevalence
Country level data for this variant is available for 23 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4798248 | MDR-TB | lineage2.2.1.1 | in | ERR4829820 | Pre-XDR-TB | lineage4.2.1 | it | SRR611415 | MDR-TB | lineage2.2.1 | None | ERR4811337 | MDR-TB | lineage2.2.1 | cn | SRR6257057 | Pre-XDR-TB | lineage2.2.1 | None | ERR11049793 | Sensitive | lineage4.1.2.1 | None | ERR4813109 | MDR-TB | lineage4 | pe | ERR2510639 | Pre-XDR-TB | lineage3 | pk | ERR4800099 | MDR-TB | lineage3 | None | SRR9971369 | MDR-TB | lineage4.1.1.3 | None | SRR7652996 | MDR-TB | lineage4.2.1 | None | ERR019552 | MDR-TB | lineage2.2 | None | ERR4821929 | Sensitive | lineage4.1.2.1 | gb | ERR2514395 | MDR-TB | lineage4 | gb | ERR8975777 | MDR-TB | lineage4.1.1.3 | None | ERR4829980 | MDR-TB | lineage4.1.3 | None | ERR9993093 | MDR-TB | lineage4.3.3 | None | ERR6866719 | RR-TB | lineage4.8 | None | ERR8665802 | MDR-TB | lineage2.2.1 | None | ERR9993072 | Pre-XDR-TB | lineage4.8 | None | SRR25534463 | Other | lineage2.2.1 | None | ERR9992819 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049729 | MDR-TB | lineage4 | None | SRR10380170 | MDR-TB | lineage2.2.1 | None | SRR1019167 | MDR-TB | lineage4.3.2.1 | None | SRR10808799 | Sensitive | lineage2.2.1 | None | SRR1140958 | MDR-TB | lineage4.3.2.1 | None | SRR1167175 | MDR-TB | lineage2.2.2 | None | SRR1165246 | MDR-TB | lineage2.2.2 | None | SRR1173850 | MDR-TB | lineage2.2.2 | None | SRR1167296 | MDR-TB | lineage2.2.2 | None | SRR1173849 | MDR-TB | lineage2.2.2 | None | SRR12416822 | MDR-TB | lineage2.2.1 | None | SRR18715165 | MDR-TB | lineage2.2.1 | None | SRR14782030 | MDR-TB | lineage2.2.1 | None | SRR13870377 | MDR-TB | lineage4.3.3 | None | SRR14088379 | MDR-TB | lineage3 | None | SRR25827705 | MDR-TB | lineage4.3.3;lineage2.2.1.1 | None | SRR20632774 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969987 | Other | lineage2.2.1.1 | None | SRR20969778 | Other | lineage2.2.1 | None | SRR21277602 | Other | lineage2.2.1 | None | SRR25827727 | MDR-TB | lineage2.2.1 | None | SRR25827875 | Pre-XDR-TB | lineage3;lineage2.2.1;lineage1.2.2.2 | None | SRR25207346 | MDR-TB | lineage2.2.1 | None | SRR25827363 | MDR-TB | lineage3;lineage2.2.1 | None | SRR25827509 | MDR-TB | lineage4.3.2;lineage3;lineage2.2.1 | None | SRR21277797 | Sensitive | lineage2.2.1.1 | None | SRR21764241 | Other | lineage4.9 | None | ERR9807026 | Pre-XDR-TB | lineage2.2.1 | None | SRR21764255 | Other | lineage4.9 | None | SRR24114362 | RR-TB | lineage3 | None | ERR9806887 | MDR-TB | lineage2.2.1 | None | SRR25827620 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827370 | MDR-TB | lineage3;lineage2.2.1 | None | SRR5341416 | MDR-TB | lineage3 | in | SAMN03246659 | MDR-TB | lineage4.5 | cn | ERR1035065 | Pre-XDR-TB | lineage2.2.1 | za | SRR3085312 | Pre-XDR-TB | lineage1.1.2 | None | SRR6824476 | MDR-TB | lineage2.2.1 | cn | SRR5341326 | MDR-TB | lineage3 | in | SAMN02350488 | MDR-TB | lineage4.3.2.1 | za | ERR4814694 | Sensitive | lineage4.1.2.1 | None | SRR5152914 | MDR-TB | lineage2.2.1 | None | ERR502927 | MDR-TB | lineage2.2.1 | None | SAMN02403478 | MDR-TB | lineage2.2.2 | za | SRR5153829 | MDR-TB | lineage2.2.1 | None | ERR7911529 | MDR-TB | lineage2.2.2 | za | ERR7911603 | MDR-TB | lineage2.2.2 | za | ERR502509 | Pre-XDR-TB | lineage5.1.5 | gh | SRR2024997 | MDR-TB | lineage2.2.1 | cn | ERR502508 | Pre-XDR-TB | lineage5.1.5 | gh | ERR2516599 | MDR-TB | lineage4 | pe | ERR1873547 | MDR-TB | lineage2.2.2 | za | ERR2179658 | MDR-TB | lineage4.5 | cn | ERR4797864 | MDR-TB | lineage2.2.1 | in |
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