Rv0006 - p.Gly88Ala
Drug resistance types
0 Sensitive
0 RR-TB
4 HR-TB
0 MDR-TB
86 Pre-XDR-TB
1 XDR-TB
4 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 7 |
| lineage2.2.1 | 32 |
| lineage4.1.2.1 | 5 |
| lineage4.2.1 | 4 |
| lineage4.2.2 | 1 |
| lineage4.8 | 1 |
| lineage4.1.2 | 2 |
| lineage3 | 5 |
| lineage4 | 2 |
| lineage2.2.1.1 | 2 |
| lineage4.3.2.1 | 5 |
| lineage4.1.1.3 | 2 |
| lineage4.3.2 | 2 |
| lineage4.1.1.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage1.1.2 | 2 |
| lineage4.3.1 | 1 |
| lineage4.5 | 5 |
| lineage2.2.2 | 4 |
| lineage1.1.1.1 | 1 |
| lineage4.1 | 1 |
| lineage1.2.2.2 | 4 |
| lineage4.9 | 1 |
| lineage4.1.1 | 4 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 95 |
Geographic prevalence
Country level data for this variant is available for 31 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR15901696 | Pre-XDR-TB | lineage4.3.3 | None | SRR13870378 | Pre-XDR-TB | lineage4.3.3 | None | SRR11972427 | Pre-XDR-TB | lineage2.2.1 | None | SRR14164398 | Other | lineage4.1.2.1 | None | SRR14782320 | Pre-XDR-TB | lineage4.2.1 | None | SRR18911561 | Pre-XDR-TB | lineage4.2.2 | None | SRR17406769 | Pre-XDR-TB | lineage4.8 | None | SRR22248471 | HR-TB | lineage4.1.2 | None | SRR3675217 | Pre-XDR-TB | lineage3 | gb | ERR11081546 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9806723 | HR-TB | lineage4 | None | ERR10112845 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR10610051 | HR-TB | lineage4 | None | ERR10610248 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR9806909 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806916 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9806710 | Pre-XDR-TB | lineage4.3.2.1 | None | SRR21887753 | Pre-XDR-TB | lineage2.2.1 | None | ERR5917769 | Pre-XDR-TB | lineage4.3.3 | by | ERR4813152 | Pre-XDR-TB | lineage4.3.3 | None | ERR4813212 | Pre-XDR-TB | lineage4.3.2 | pe | SAMN02403602 | Pre-XDR-TB | lineage4.1.1.1 | za | ERR3148167 | Pre-XDR-TB | lineage4.3.2 | mx | SRR3743379 | Pre-XDR-TB | lineage4.2.1 | None | SRR2024966 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2510350 | Pre-XDR-TB | lineage3 | pk | ERR2517020 | Pre-XDR-TB | lineage3 | gb | ERR2515407 | Pre-XDR-TB | lineage4.3.2.1 | za | ERR2652999 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR2515199 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR4827663 | Pre-XDR-TB | lineage2.2.1 | None | SRR5709793 | Pre-XDR-TB | lineage2.2.1 | th | ERR4827447 | Pre-XDR-TB | lineage2.2.1 | None | SRR5709911 | Pre-XDR-TB | lineage2.2.1.1 | th | ERR4831596 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831464 | Pre-XDR-TB | lineage1.1.2 | None | ERR10748266 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR3014596 | Pre-XDR-TB | lineage4.3.1 | tn | SRR7276704 | Other | lineage4.1.2 | None | SRR8651581 | Pre-XDR-TB | lineage4.5 | None | SRR671867 | Pre-XDR-TB | lineage2.2.1 | cn | SAMN02398712 | Pre-XDR-TB | lineage2.2.2 | kr | SRR6824541 | Pre-XDR-TB | lineage4.5 | cn | SRR9738510 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR8651578 | Pre-XDR-TB | lineage4.5 | cn | DRR130069 | Pre-XDR-TB | lineage2.2.1 | None | DRR130178 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035096 | Pre-XDR-TB | lineage1.1.1.1 | vn | ERR10762353 | Pre-XDR-TB | lineage4.2.1 | None | ERR10762278 | Pre-XDR-TB | lineage4.1 | None | ERR11043054 | Pre-XDR-TB | lineage3 | None | ERR4797391 | Pre-XDR-TB | lineage2.2.1 | in | ERR133896 | Pre-XDR-TB | lineage2.2.1 | ru | ERR4796951 | Pre-XDR-TB | lineage2.2.1 | in | ERR11043224 | Other | lineage4.3.3 | None | ERR4797702 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797968 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798252 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798175 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799209 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799315 | Pre-XDR-TB | lineage2.2.1 | in | ERR5866450 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800449 | Pre-XDR-TB | lineage2.2.1 | in | ERR4811017 | Other | lineage2.2.1 | None | ERR5866449 | Pre-XDR-TB | lineage2.2.1 | None | ERR4809304 | Pre-XDR-TB | lineage4.3.2.1 | za | ERR7911693 | Pre-XDR-TB | lineage2.2.1 | za | ERR5897119 | Pre-XDR-TB | lineage3 | None | ERR5987258 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975847 | Pre-XDR-TB | lineage2.2.2 | None | ERR8665744 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665745 | Pre-XDR-TB | lineage2.2.1 | None | ERR8774569 | Pre-XDR-TB | lineage2.2.1 | None | ERR9030459 | Pre-XDR-TB | lineage2.2.2 | None | ERR9120129 | Pre-XDR-TB | lineage2.2.1 | None | ERR9120128 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992999 | Pre-XDR-TB | lineage4.3.3 | None | ERR9992611 | XDR-TB | lineage1.2.2.2 | None | ERR9992615 | Pre-XDR-TB | lineage4.3.3 | None | ERR9992971 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR9993094 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR10380062 | Pre-XDR-TB | lineage4.2.1 | None | ERR9993260 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR10500315 | Pre-XDR-TB | lineage1.1.2 | None | SRR1062868 | HR-TB | lineage4.9 | None | SRR10869203 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR10869205 | Pre-XDR-TB | lineage2.2.1 | None | SRR1144780 | Pre-XDR-TB | lineage2.2.2 | None | SRR11567801 | Pre-XDR-TB | lineage4.5 | None | SRR11567799 | Pre-XDR-TB | lineage4.5 | None | SRR1165707 | Pre-XDR-TB | lineage4.1.1 | None | SRR1165693 | Pre-XDR-TB | lineage4.1.1 | None | SRR1166189 | Pre-XDR-TB | lineage4.1.2.1 | ro | SRR1169244 | Pre-XDR-TB | lineage4.1.1 | None | SRR1169283 | Pre-XDR-TB | lineage4.1.1 | None |
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