lineage | Count |
---|---|
lineage3 | 5 |
lineage2.2.1 | 12 |
lineage4.4.1.1.1 | 75 |
lineage4.8 | 6 |
lineage4.3.4.2.1 | 4 |
lineage4.3.4.1 | 2 |
lineage4.6.1.1 | 2 |
lineage1.1.3.1 | 4 |
lineage4.2.1.1 | 2 |
lineage1.1.1.1;lineage2.2.1 | 1 |
lineage1.1.2 | 2 |
lineage4.2.2 | 1 |
lineage4.3.4.2 | 1 |
lineage4.5 | 3 |
lineage2.2.1;lineage4.3.3 | 1 |
lineage4.1.1 | 1 |
lineage4.6.2.2 | 2 |
lineage4.3.3 | 3 |
lineage1.2.1.2.1 | 1 |
lineage4.1.2.1 | 1 |
lineage3.1.2 | 1 |
lineage2.2.1.1 | 1 |
lineage4.9 | 1 |
lineage4.4.2 | 1 |
lineage2.2.2 | 1 |
spoligotype | Count |
---|---|
None | 134 |
ID | Drug resistance | Lineage | Country iso2 | SRR28044462 | Sensitive | lineage3 | None | SRR28044868 | HR-TB | lineage3 | None | SRR21690072 | Sensitive | lineage2.2.1 | None | SRR6855812 | Sensitive | lineage4.4.1.1.1 | None | ERR3273176 | MDR-TB | lineage2.2.1 | None | ERR386884 | MDR-TB | lineage4.8 | None | ERR190384 | Sensitive | lineage4.3.4.2.1 | mw | ERR4831060 | Sensitive | lineage3 | np | SRR28868730 | Sensitive | lineage4.3.4.1 | None | ERR13260342 | HR-TB | lineage4.3.4.1 | None | ERR4796705 | Sensitive | lineage3 | in | SRR21711127 | Other | lineage2.2.1 | None | SRR4035554 | Sensitive | lineage4.4.1.1.1 | za | SRR4036000 | Sensitive | lineage4.4.1.1.1 | za | SRR4035984 | Sensitive | lineage4.4.1.1.1 | za | ERR1199023 | Sensitive | lineage4.6.1.1 | ug | SRR6797466 | Sensitive | lineage1.1.3.1 | None | SRR4035587 | Sensitive | lineage4.4.1.1.1 | None | SRR4036001 | Sensitive | lineage4.4.1.1.1 | None | SRR4035942 | Sensitive | lineage4.4.1.1.1 | za | SRR4035981 | Sensitive | lineage4.4.1.1.1 | za | ERR13273022 | Other | lineage4.2.1.1 | None | SRR4035876 | Sensitive | lineage4.4.1.1.1 | None | ERR4831827 | MDR-TB | lineage1.1.1.1;lineage2.2.1 | vn | ERR4011986 | Sensitive | lineage4.3.4.2.1 | None | ERR2515428 | Sensitive | lineage4.4.1.1.1 | za | SRR12882153 | Sensitive | lineage3 | None | SRR4035909 | Sensitive | lineage4.4.1.1.1 | za | SRR4035995 | Sensitive | lineage4.4.1.1.1 | za | SRR4035865 | Sensitive | lineage4.4.1.1.1 | za | SRR28045634 | HR-TB | lineage1.1.2 | None | SRR4035521 | Sensitive | lineage4.4.1.1.1 | za | SRR4035610 | Sensitive | lineage4.4.1.1.1 | za | SRR4035754 | Sensitive | lineage4.4.1.1.1 | za | SRR4035953 | Sensitive | lineage4.4.1.1.1 | za | SRR4035988 | Sensitive | lineage4.4.1.1.1 | za | ERR2515260 | Sensitive | lineage4.4.1.1.1 | None | SRR4035731 | Sensitive | lineage4.4.1.1.1 | za | SRR6896516 | Sensitive | lineage4.4.1.1.1 | None | ERR1465860 | Sensitive | lineage4.8 | None | ERR8975681 | MDR-TB | lineage4.4.1.1.1 | None | SRR4036003 | Sensitive | lineage4.4.1.1.1 | None | SRR4035887 | Sensitive | lineage4.4.1.1.1 | za | SRR4035576 | Sensitive | lineage4.4.1.1.1 | None | SRR4035976 | Sensitive | lineage4.4.1.1.1 | za | SRR2100912 | MDR-TB | lineage4.8 | None | ERR11043407 | Sensitive | lineage4.2.2 | None | SRR4035488 | Sensitive | lineage4.4.1.1.1 | za | SRR4035532 | Sensitive | lineage4.4.1.1.1 | None | SRR29539858 | HR-TB | lineage4.3.4.2 | None | SRR4035543 | Sensitive | lineage4.4.1.1.1 | None | SRR4035831 | Sensitive | lineage4.4.1.1.1 | za | SRR4035998 | Sensitive | lineage4.4.1.1.1 | None | SRR26112629 | Sensitive | lineage4.5 | None | SRR4035993 | Sensitive | lineage4.4.1.1.1 | None | SRR10380209 | MDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR4035809 | Sensitive | lineage4.4.1.1.1 | za | SRR4035992 | Sensitive | lineage4.4.1.1.1 | za | SRR4035983 | Sensitive | lineage4.4.1.1.1 | za | SRR4035931 | Sensitive | lineage4.4.1.1.1 | None | SRR4035776 | Sensitive | lineage4.4.1.1.1 | za | ERR4829622 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975572 | Sensitive | lineage2.2.1 | None | SRR18665481 | Sensitive | lineage4.8 | None | ERR4810580 | Sensitive | lineage2.2.1 | cn | SRR4035975 | Sensitive | lineage4.4.1.1.1 | za | SRR18913750 | Other | lineage2.2.1 | None | SRR28045786 | Sensitive | lineage1.1.2 | None | ERR551413 | Sensitive | lineage4.8 | de | SRR4035997 | Sensitive | lineage4.4.1.1.1 | za | SRR4035842 | Sensitive | lineage4.4.1.1.1 | za | SRR4035565 | Sensitive | lineage4.4.1.1.1 | None | SRR4035987 | Sensitive | lineage4.4.1.1.1 | za | ERR4809048 | Sensitive | lineage4.4.1.1.1 | za | SRR6797611 | Sensitive | lineage1.1.3.1 | None | ERR278525 | MDR-TB | lineage4.8 | None | SRR4035672 | Sensitive | lineage4.4.1.1.1 | za | SRR4036018 | Sensitive | lineage4.4.1.1.1 | None | SRR28409590 | RR-TB | lineage2.2.1 | None | SRR4035510 | Sensitive | lineage4.4.1.1.1 | None | SRR4035599 | Sensitive | lineage4.4.1.1.1 | za | SRR25515227 | Sensitive | lineage4.5 | None | SRR4035990 | Sensitive | lineage4.4.1.1.1 | za | SRR29126877 | Pre-XDR-TB | lineage2.2.1 | None | SRR4035798 | Sensitive | lineage4.4.1.1.1 | za | SRR3725704 | Sensitive | lineage4.1.1 | None | SRR4035661 | Sensitive | lineage4.4.1.1.1 | za | SRR6797467 | Sensitive | lineage1.1.3.1 | None | SRR4035986 | Sensitive | lineage4.4.1.1.1 | za | SRR11444154 | Sensitive | lineage4.6.2.2 | None | SRR4035853 | Sensitive | lineage4.4.1.1.1 | za | SRR4036007 | Sensitive | lineage4.4.1.1.1 | za | ERR13248829 | Sensitive | lineage2.2.1 | None | SRR14782625 | HR-TB | lineage4.3.3 | None | ERR11775514 | Sensitive | lineage4.4.1.1.1 | None | ERR11049952 | Sensitive | lineage1.2.1.2.1 | None | ERR11067266 | MDR-TB | lineage4.3.3 | None | SRR4035720 | Sensitive | lineage4.4.1.1.1 | za | SRR4035650 | Sensitive | lineage4.4.1.1.1 | None | SRR4035709 | Sensitive | lineage4.4.1.1.1 | za | SRR4035820 | Sensitive | lineage4.4.1.1.1 | za | SRR4035991 | Sensitive | lineage4.4.1.1.1 | za | SRR28046212 | Sensitive | lineage1.1.3.1 | None | ERR13285316 | Sensitive | lineage2.2.1 | None | SRR4035964 | Sensitive | lineage4.4.1.1.1 | za | SRR4035787 | Sensitive | lineage4.4.1.1.1 | za | ERR11067934 | Sensitive | lineage4.1.2.1 | None | SRR4035999 | Sensitive | lineage4.4.1.1.1 | za | SRR25340896 | Sensitive | lineage3.1.2 | None | SRR4035499 | Sensitive | lineage4.4.1.1.1 | None | SRR29093608 | Sensitive | lineage4.3.4.2.1 | None | ERR7363039 | Sensitive | lineage4.3.3 | None | SRR4035765 | Sensitive | lineage4.4.1.1.1 | None | SRR4036005 | Sensitive | lineage4.4.1.1.1 | za | SRR4035996 | Sensitive | lineage4.4.1.1.1 | za | SRR4036004 | Sensitive | lineage4.4.1.1.1 | za | SRR4035898 | Sensitive | lineage4.4.1.1.1 | za | SRR21277720 | Sensitive | lineage2.2.1.1 | None | SRR4036002 | Sensitive | lineage4.4.1.1.1 | None | DRR188757 | Sensitive | lineage2.2.1 | None | SRR4035920 | Sensitive | lineage4.4.1.1.1 | za | ERR8774550 | Sensitive | lineage4.9 | None | SRR25515063 | Sensitive | lineage4.4.2 | None | ERR4011985 | Sensitive | lineage4.3.4.2.1 | None | SRR4035621 | Sensitive | lineage4.4.1.1.1 | None | DRR184673 | Sensitive | lineage4.6.2.2 | vn | ERR11082134 | Other | lineage4.2.1.1 | None | SRR4035979 | Sensitive | lineage4.4.1.1.1 | za | SRR4035982 | Sensitive | lineage4.4.1.1.1 | za | SRR4035978 | Sensitive | lineage4.4.1.1.1 | za | SRR17657998 | Sensitive | lineage4.6.1.1 | None | SRR4035980 | Sensitive | lineage4.4.1.1.1 | za | SRR5065371 | Pre-XDR-TB | lineage2.2.2 | vn | SRR11662258 | HR-TB | lineage4.5 | None |
---|