Rv0010c - c.-80A>G
Drug resistance types
68 Sensitive
5 RR-TB
30 HR-TB
38 MDR-TB
54 Pre-XDR-TB
1 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 94 |
| lineage4.1.1.1 | 4 |
| lineage4.8 | 29 |
| lineage3.1.2.1 | 2 |
| lineage2.2.1.1 | 7 |
| lineage4.1.2.1 | 16 |
| lineage2.2.2 | 18 |
| lineage2.2.1;lineage3 | 1 |
| lineage3 | 7 |
| lineage4.1 | 1 |
| lineage3.1.2 | 2 |
| lineage3.1.2.2 | 1 |
| lineage4.4.2 | 2 |
| lineage4.6 | 2 |
| lineage4.1.2 | 2 |
| lineage4.5 | 11 |
| lineage4.7 | 3 |
| lineage1.2.2.2 | 2 |
| lineage4.3.4.1 | 2 |
| lineage1.1.2 | 1 |
| lineage4.1.1.2 | 3 |
| lineage4.8.1 | 1 |
| lineage4.2.2.1 | 1 |
| lineage2.2.1;lineage4.3.3 | 1 |
| lineage4.1.1 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage2.2.1;lineage4.3.4.1 | 1 |
| lineage1.2.2.1 | 1 |
| lineage4.2.2 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 221 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR25515372 | Sensitive | lineage2.2.1 | None | SRR15316399 | MDR-TB | lineage2.2.1 | None | SRR6397928 | HR-TB | lineage4.1.1.1 | ca | ERR13245864 | Sensitive | lineage2.2.1 | None | ERR5864781 | Pre-XDR-TB | lineage2.2.1 | None | ERR13278949 | MDR-TB | lineage4.8 | None | ERR9119272 | Sensitive | lineage2.2.1 | None | SRR1723570 | Pre-XDR-TB | lineage2.2.1 | cn | ERR1034597 | Pre-XDR-TB | lineage3.1.2.1 | pk | ERR2510252 | Pre-XDR-TB | lineage2.2.1.1 | pk | SRR13423549 | Pre-XDR-TB | lineage2.2.1 | None | ERR911930 | Other | lineage4.8 | None | SRR10851665 | Sensitive | lineage4.8 | None | ERR6866649 | Sensitive | lineage4.8 | None | SRR15316393 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR9786162 | HR-TB | lineage4.1.2.1 | None | SRR26399186 | Sensitive | lineage2.2.1 | None | SRR20969644 | MDR-TB | lineage2.2.1 | None | SRR1013546 | Pre-XDR-TB | lineage2.2.2 | None | ERR133861 | MDR-TB | lineage2.2.1 | ru | ERR9119204 | Other | lineage2.2.1 | None | ERR4822208 | HR-TB | lineage4.1.2.1 | gb | ERR13265139 | MDR-TB | lineage2.2.1 | None | ERR9119315 | Sensitive | lineage2.2.1 | None | ERR023754 | Sensitive | lineage4.1.2.1 | None | SRR25827370 | MDR-TB | lineage2.2.1;lineage3 | None | ERR1213858 | MDR-TB | lineage2.2.1 | kr | SRR17832807 | Sensitive | lineage3 | None | ERR11083011 | MDR-TB | lineage4.8 | None | SRR6896529 | Sensitive | lineage4.1.1.1 | None | ERR10680142 | RR-TB | lineage4.1 | None | SRR1048861 | Pre-XDR-TB | lineage2.2.2 | None | ERR911929 | Other | lineage4.8 | None | SRR13423601 | Sensitive | lineage4.8 | None | SRR26399270 | Other | lineage2.2.1 | None | ERR4817266 | Sensitive | lineage3 | None | ERR5864780 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866413 | MDR-TB | lineage2.2.1 | None | ERR228225 | Sensitive | lineage3.1.2 | None | SRR1013561 | Pre-XDR-TB | lineage2.2.2 | None | ERR911928 | Sensitive | lineage4.8 | None | ERR2514627 | Sensitive | lineage3.1.2.2 | gb | SRR25389523 | HR-TB | lineage2.2.1 | None | DRR034519 | Sensitive | lineage2.2.1 | None | SAMN02360560 | Pre-XDR-TB | lineage2.2.2 | kr | ERR9029372 | Sensitive | lineage2.2.1.1 | None | SRR28045908 | XDR-TB | lineage2.2.1 | None | SRR6824453 | MDR-TB | lineage2.2.1 | cn | SRR28351254 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040146 | RR-TB | lineage4.4.2 | None | ERR13266956 | Pre-XDR-TB | lineage2.2.1 | None | ERR2791539 | Sensitive | lineage4.6 | None | ERR5866449 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013562 | Pre-XDR-TB | lineage2.2.2 | None | ERR4132440 | Sensitive | lineage2.2.1 | None | SRR23861763 | Sensitive | lineage4.8 | None | SRR29052968 | Other | lineage4.1.2 | None | ERR13290720 | Pre-XDR-TB | lineage2.2.1 | None | ERR9634294 | Sensitive | lineage4.5 | None | SRR29051005 | MDR-TB | lineage4.1.2.1 | None | ERR13266132 | Pre-XDR-TB | lineage2.2.1 | None | ERR978770 | Sensitive | lineage4.8 | gl | ERR2513538 | HR-TB | lineage2.2.1 | gb | SRR1003106 | Pre-XDR-TB | lineage2.2.2 | None | ERR2791559 | Sensitive | lineage4.6 | None | SRR29052647 | Other | lineage2.2.1 | None | ERR8975576 | HR-TB | lineage2.2.1 | None | ERR9121649 | Other | lineage4.1.2.1 | None | ERR3148044 | MDR-TB | lineage4.8 | None | SRR26937005 | MDR-TB | lineage4.8 | None | ERR4822301 | MDR-TB | lineage4.8 | None | ERR13291122 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782032 | Sensitive | lineage2.2.1 | None | ERR5864779 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972357 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR5073865 | HR-TB | lineage2.2.1 | vn | SRR10306027 | Pre-XDR-TB | lineage2.2.1 | None | ERR1274704 | HR-TB | lineage4.1.1.1 | None | ERR4811012 | Sensitive | lineage4.5 | cn | ERR1034628 | HR-TB | lineage4.7 | br | SRR7069920 | HR-TB | lineage2.2.1 | None | ERR4830421 | Other | lineage2.2.1 | vn | ERR4827783 | MDR-TB | lineage2.2.1 | None | SRR12931724 | HR-TB | lineage4.1.2.1 | None | ERR4830238 | Sensitive | lineage2.2.1 | vn | SRR1013683 | Pre-XDR-TB | lineage2.2.2 | None | ERR6544662 | HR-TB | lineage4.7 | None | SRR5709743 | Sensitive | lineage4.5 | th | SRR10380214 | HR-TB | lineage2.2.1 | None | SRR1049068 | Pre-XDR-TB | lineage2.2.2 | None | ERR4814642 | Sensitive | lineage1.2.2.2 | None | ERR3256203 | MDR-TB | lineage4.3.4.1 | ph | SRR6824532 | Pre-XDR-TB | lineage2.2.1 | cn | SRR29538903 | Pre-XDR-TB | lineage2.2.1 | None | DRR184618 | Sensitive | lineage4.8 | vn | SRR13232628 | MDR-TB | lineage2.2.1 | None | DRR188498 | Sensitive | lineage2.2.1 | None | ERR9634266 | Sensitive | lineage4.5 | None | SRR20632773 | Pre-XDR-TB | lineage2.2.1 | None | ERR400427 | Sensitive | lineage4.1.2.1 | gb | ERR2513399 | HR-TB | lineage2.2.1 | gb | SRR26937026 | MDR-TB | lineage2.2.1 | None | ERR978768 | Sensitive | lineage4.8 | None | ERR3132088 | MDR-TB | lineage2.2.1 | None | SRR1049069 | Pre-XDR-TB | lineage2.2.2 | None | SRR25389414 | HR-TB | lineage2.2.1.1 | None | ERR5866414 | MDR-TB | lineage2.2.1 | None | ERR4831736 | HR-TB | lineage2.2.1 | vn | ERR4798315 | Other | lineage4.5 | in | SAMN02360552 | Pre-XDR-TB | lineage2.2.2 | kr | SRR19304125 | Sensitive | lineage2.2.1 | None | ERR4830278 | Sensitive | lineage2.2.1 | vn | ERR4817976 | HR-TB | lineage4.1.2.1 | None | SRR2100579 | Sensitive | lineage3.1.2 | None | ERR5866450 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081881 | MDR-TB | lineage2.2.1 | None | SRR18715314 | MDR-TB | lineage2.2.1 | None | SRR7657758 | HR-TB | lineage4.8 | None | ERR1034584 | Pre-XDR-TB | lineage3 | pk | ERR2513477 | Sensitive | lineage4.7 | gb | SRR29127089 | MDR-TB | lineage2.2.1 | None | SRR29772625 | MDR-TB | lineage1.1.2 | None | SRR12931685 | HR-TB | lineage4.1.2.1 | None | SRR15316174 | Sensitive | lineage4.4.2 | None | SRR16370671 | Other | lineage2.2.1 | None | SRR5065303 | MDR-TB | lineage2.2.1 | vn | SRR5067658 | Other | lineage2.2.1 | vn | SRR28046248 | Sensitive | lineage3 | None | ERR4829549 | MDR-TB | lineage2.2.1 | it | SRR1048862 | Pre-XDR-TB | lineage2.2.2 | None | SRR14782773 | Sensitive | lineage4.3.4.1 | None | SRR29051513 | MDR-TB | lineage4.1.2.1 | None | SRR20969803 | HR-TB | lineage2.2.1 | None | ERR2179837 | Sensitive | lineage4.5 | cn | ERR13291130 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810694 | Sensitive | lineage4.5 | cn | SRR23310923 | HR-TB | lineage2.2.1 | None | ERR4830467 | Other | lineage2.2.1 | vn | SRR21733364 | Sensitive | lineage4.5 | None | ERR10610346 | RR-TB | lineage4.1.1.2 | None | SRR26399786 | Other | lineage2.2.1 | None | ERR4817315 | Sensitive | lineage1.2.2.2 | gb | DRR184921 | Sensitive | lineage2.2.1 | vn | ERR11067720 | HR-TB | lineage4.8.1 | None | SRR7068997 | Sensitive | lineage4.8 | None | SRR25389476 | HR-TB | lineage2.2.1 | None | SRR1003104 | Pre-XDR-TB | lineage2.2.2 | None | ERR4821135 | Sensitive | lineage4.1.2.1 | gb | ERR025432 | Sensitive | lineage4.2.2.1 | nl | ERR2229169 | Sensitive | lineage4.8 | None | ERR10610225 | RR-TB | lineage4.1.1.2 | None | SRR29538991 | HR-TB | lineage2.2.1 | None | SRR7069282 | HR-TB | lineage2.2.1 | None | ERR13261098 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796805 | MDR-TB | lineage2.2.1 | in | SRR29539169 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360626 | Pre-XDR-TB | lineage2.2.2 | kr | ERR5866412 | MDR-TB | lineage2.2.1 | None | SRR6785503 | HR-TB | lineage2.2.1 | None | ERR978769 | Sensitive | lineage4.8 | None | SRR1048844 | Pre-XDR-TB | lineage2.2.2 | None | ERR4800570 | Pre-XDR-TB | lineage2.2.1 | in | ERR13266955 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043799 | MDR-TB | lineage4.8 | None | SRR13583408 | MDR-TB | lineage4.1.2.1 | None | SAMN02360616 | Pre-XDR-TB | lineage2.2.2 | kr | ERR137231 | Pre-XDR-TB | lineage2.2.1 | ru | ERR4822002 | Sensitive | lineage4.1.2.1 | gb | SRR26112203 | Sensitive | lineage4.5 | None | SRR28240063 | Other | lineage4.8 | None | ERR9029374 | Sensitive | lineage2.2.1.1 | None | SRR28706553 | Pre-XDR-TB | lineage2.2.1 | None | SRR21676309 | Other | lineage4.1.2 | None | SRR10809063 | Sensitive | lineage4.5 | None | ERR4819519 | Sensitive | lineage4.8 | gb | SRR24710070 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR3647359 | MDR-TB | lineage2.2.1 | None | SRR29052775 | Other | lineage4.1.1 | None | ERR4195301 | Other | lineage4.1.2.1 | None | SRR29055618 | MDR-TB | lineage4.3.4.2.1 | None | ERR688016 | Pre-XDR-TB | lineage3 | None | ERR2513622 | Sensitive | lineage4.8 | gb | SRR1048845 | Pre-XDR-TB | lineage2.2.2 | None | ERR9806711 | RR-TB | lineage4.1.1.2 | None | SRR28859990 | Sensitive | lineage4.1.1 | None | ERR8774569 | Pre-XDR-TB | lineage2.2.1 | None | SRR5065403 | Other | lineage2.2.1 | vn | SRR28044881 | HR-TB | lineage3 | None | ERR978807 | Sensitive | lineage4.8 | gl | SRR29539660 | MDR-TB | lineage2.2.1;lineage4.3.4.1 | None | ERR9029376 | Sensitive | lineage2.2.1.1 | None | ERR9119436 | Other | lineage2.2.1 | None | ERR108443 | MDR-TB | lineage2.2.1 | ru | SRR5067496 | Other | lineage2.2.1 | vn | SRR13423551 | Pre-XDR-TB | lineage2.2.1 | None | SRR13583428 | MDR-TB | lineage4.1.2.1 | None | SRR16103889 | HR-TB | lineage2.2.1 | None | SRR19303945 | Sensitive | lineage4.8 | None | ERR9029370 | Sensitive | lineage2.2.1.1 | None | SRR1013682 | Pre-XDR-TB | lineage2.2.2 | None | ERR13292094 | HR-TB | lineage2.2.1 | None | ERR13260104 | Other | lineage4.8 | None | ERR2515141 | Sensitive | lineage4.1.1.1 | None | SRR16089548 | Other | lineage1.2.2.1 | None | ERR688029 | Pre-XDR-TB | lineage3.1.2.1 | None | ERR5864776 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723880 | Sensitive | lineage2.2.1 | cn | SRR1013545 | Pre-XDR-TB | lineage2.2.2 | None | SRR16370547 | MDR-TB | lineage4.2.2 | None | ERR11489042 | Pre-XDR-TB | lineage4.3.4.2.1 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | SRR28860155 | HR-TB | lineage4.8 | None | SRR26399457 | Sensitive | lineage2.2.1 | None | SRR8347539 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911325 | MDR-TB | lineage4.2.2 | vn | ERR11044866 | Sensitive | lineage4.1.2.1 | None | ERR11049729 | Sensitive | lineage4.5 | None | SRR5067631 | Sensitive | lineage2.2.1 | vn | SRR6046417 | Sensitive | lineage3 | gb | SRR19267911 | Other | lineage2.2.1 | None |
|---|
