lineage | Count |
---|---|
lineage2.2.2 | 148 |
lineage2.2.1;lineage2.2.2 | 2 |
lineage1.1.2 | 1 |
lineage1.2.2.2 | 5 |
lineage2.2.1 | 3 |
lineage3 | 1 |
lineage4.1.2.1 | 1 |
spoligotype | Count |
---|---|
None | 161 |
ID | Drug resistance | Lineage | Country iso2 | SRR25207353 | Pre-XDR-TB | lineage2.2.2 | None | SRR10040545 | MDR-TB | lineage2.2.2 | None | SRR12062557 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR10040475 | Pre-XDR-TB | lineage2.2.2 | None | ERR4800652 | Sensitive | lineage1.1.2 | None | SRR8651653 | Pre-XDR-TB | lineage2.2.2 | cn | SRR25207198 | Pre-XDR-TB | lineage2.2.2 | None | SRR21887737 | MDR-TB | lineage2.2.2 | None | ERR13235265 | MDR-TB | lineage2.2.2 | None | SRR2063843 | RR-TB | lineage2.2.2 | None | SRR6280264 | RR-TB | lineage2.2.2 | cn | SRR6280263 | RR-TB | lineage2.2.2 | cn | SRR1723432 | Sensitive | lineage2.2.2 | cn | SRR2063840 | RR-TB | lineage2.2.2 | None | ERR2020044 | Pre-XDR-TB | lineage2.2.2 | None | SRR1723433 | Sensitive | lineage2.2.2 | None | ERR2027254 | HR-TB | lineage2.2.2 | None | SRR21279424 | Sensitive | lineage2.2.2 | None | SRR28860015 | Sensitive | lineage1.2.2.2 | None | SRR23691420 | MDR-TB | lineage2.2.2 | None | SRR28467049 | Pre-XDR-TB | lineage2.2.2 | None | ERR1352349 | RR-TB | lineage2.2.2 | cn | SRR18003014 | Sensitive | lineage2.2.2 | None | SRR20632807 | Pre-XDR-TB | lineage2.2.2 | None | SRR6824616 | MDR-TB | lineage2.2.2 | cn | ERR4810983 | MDR-TB | lineage2.2.2 | cn | SRR6280216 | RR-TB | lineage2.2.2 | cn | SRR28385877 | MDR-TB | lineage2.2.2 | None | SRR28119818 | MDR-TB | lineage2.2.2 | None | SRR25206912 | MDR-TB | lineage2.2.2 | None | SRR8651641 | Pre-XDR-TB | lineage2.2.2 | cn | ERR1352345 | RR-TB | lineage2.2.2 | cn | SRR25515040 | Sensitive | lineage2.2.2 | None | SRR28859774 | Sensitive | lineage2.2.2 | None | SRR6280311 | MDR-TB | lineage2.2.2 | cn | SRR15723172 | Pre-XDR-TB | lineage2.2.2 | None | ERR752250 | Sensitive | lineage1.2.2.2 | th | SRR18511626 | Sensitive | lineage2.2.2 | None | ERR4811104 | Sensitive | lineage2.2.1 | cn | SRR30180428 | MDR-TB | lineage2.2.2 | None | SRR18511606 | Sensitive | lineage2.2.2 | None | SRR25515877 | Sensitive | lineage2.2.2 | None | SRR18213732 | Other | lineage3 | None | SRR10040188 | Pre-XDR-TB | lineage2.2.2 | None | ERR4810636 | Sensitive | lineage2.2.2 | cn | ERR751940 | Sensitive | lineage1.2.2.2 | th | ERR4810477 | Pre-XDR-TB | lineage2.2.2 | cn | SRR10040403 | MDR-TB | lineage2.2.2 | None | SRR23691341 | Sensitive | lineage2.2.2 | None | SRR29093378 | MDR-TB | lineage2.2.2 | None | ERR502885 | XDR-TB | lineage2.2.2 | None | SRR2063842 | RR-TB | lineage2.2.2 | None | SRR1723431 | Pre-XDR-TB | lineage2.2.2 | cn | SRR10040138 | MDR-TB | lineage2.2.2 | None | SRR6280137 | RR-TB | lineage2.2.2 | cn | SRR5894884 | XDR-TB | lineage2.2.2 | None | ERR11068464 | Sensitive | lineage2.2.2 | None | ERR4811282 | Pre-XDR-TB | lineage2.2.2 | cn | SRR30182333 | Sensitive | lineage2.2.2 | None | SRR20632817 | Pre-XDR-TB | lineage2.2.2 | None | SRR25389494 | Pre-XDR-TB | lineage2.2.2 | None | SRR21887657 | Pre-XDR-TB | lineage2.2.2 | None | ERR8774548 | Sensitive | lineage4.1.2.1 | None | SRR28385878 | MDR-TB | lineage2.2.2 | None | ERR13291082 | HR-TB | lineage2.2.2 | None | SRR25628558 | Sensitive | lineage2.2.2 | None | SRR21279414 | Pre-XDR-TB | lineage2.2.2 | None | SRR25515226 | MDR-TB | lineage2.2.2 | None | SRR13180293 | Sensitive | lineage2.2.2 | None | SRR6824290 | MDR-TB | lineage2.2.2 | cn | SRR25207263 | Pre-XDR-TB | lineage2.2.2 | None | ERR4811328 | Pre-XDR-TB | lineage2.2.2 | cn | SRR1710093 | MDR-TB | lineage2.2.2 | cn | ERR13245345 | Pre-XDR-TB | lineage2.2.2 | None | SRR1723435 | MDR-TB | lineage2.2.2 | None | SRR2063844 | RR-TB | lineage2.2.2 | None | SRR1013623 | Pre-XDR-TB | lineage2.2.2 | None | SRR15315720 | Sensitive | lineage2.2.2 | None | ERR551184 | Sensitive | lineage2.2.2 | None | SRR10040204 | Pre-XDR-TB | lineage2.2.2 | None | SRR25206917 | Pre-XDR-TB | lineage2.2.2 | None | SRR25515349 | MDR-TB | lineage2.2.2 | None | SRR1710111 | MDR-TB | lineage2.2.2 | cn | SRR1723434 | MDR-TB | lineage2.2.2 | cn | SRR20632779 | Pre-XDR-TB | lineage2.2.2 | None | SRR21277127 | Other | lineage2.2.2 | None | SRR15316540 | Sensitive | lineage2.2.2 | None | SRR10040313 | MDR-TB | lineage2.2.2 | None | SAMN02360592 | Pre-XDR-TB | lineage2.2.2 | kr | SRR23691441 | Sensitive | lineage2.2.2 | None | SRR21277392 | Sensitive | lineage2.2.2 | None | SRR22249438 | Sensitive | lineage2.2.2 | None | SRR15316156 | HR-TB | lineage2.2.2 | None | SRR10040549 | Pre-XDR-TB | lineage2.2.2 | None | SRR25207233 | MDR-TB | lineage2.2.2 | None | SRR29093924 | Pre-XDR-TB | lineage2.2.2 | None | ERR4810576 | MDR-TB | lineage2.2.2 | cn | SRR27069410 | Pre-XDR-TB | lineage2.2.2 | None | SRR25207090 | Pre-XDR-TB | lineage2.2.2 | None | SRR25207112 | MDR-TB | lineage2.2.2 | None | ERR502919 | Sensitive | lineage2.2.1 | None | SRR18003043 | Pre-XDR-TB | lineage2.2.2 | None | SRR10040266 | MDR-TB | lineage2.2.2 | None | ERR2516781 | Pre-XDR-TB | lineage2.2.2 | gb | SAMEA2533759 | Sensitive | lineage2.2.2 | de | SRR6824613 | Pre-XDR-TB | lineage2.2.2 | cn | SRR28119778 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR28385883 | MDR-TB | lineage2.2.2 | None | SRR25515528 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049009 | Pre-XDR-TB | lineage2.2.2 | None | SRR25515396 | Sensitive | lineage2.2.2 | None | ERR751817 | Sensitive | lineage1.2.2.2 | th | SRR25534335 | MDR-TB | lineage2.2.2 | None | SRR25389496 | MDR-TB | lineage2.2.2 | None | SRR25389493 | Pre-XDR-TB | lineage2.2.2 | None | SRR8651606 | Pre-XDR-TB | lineage2.2.2 | None | SRR29385484 | Pre-XDR-TB | lineage2.2.1;lineage2.2.2 | None | SRR29914412 | MDR-TB | lineage2.2.2 | None | SRR28119839 | MDR-TB | lineage2.2.2 | None | ERR4810482 | Pre-XDR-TB | lineage2.2.2 | cn | SRR12006634 | Sensitive | lineage2.2.2 | None | SRR1049010 | Pre-XDR-TB | lineage2.2.2 | None | ERR751953 | Sensitive | lineage1.2.2.2 | th | SRR12062555 | HR-TB | lineage2.2.2 | None | SRR15316536 | Sensitive | lineage2.2.1 | None | SRR20969412 | Sensitive | lineage2.2.2 | None | SRR6280305 | MDR-TB | lineage2.2.2 | cn | SRR29056190 | HR-TB | lineage2.2.2 | None | SRR25389498 | HR-TB | lineage2.2.2 | None | SRR28119832 | Pre-XDR-TB | lineage2.2.2 | None | SRR25534512 | Sensitive | lineage2.2.2 | None | ERR1352346 | RR-TB | lineage2.2.2 | cn | ERR4810851 | Pre-XDR-TB | lineage2.2.2 | cn | SRR28385879 | HR-TB | lineage2.2.2 | None | ERR1352348 | RR-TB | lineage2.2.2 | cn | SRR25515489 | Sensitive | lineage2.2.2 | None | SRR25515487 | Pre-XDR-TB | lineage2.2.2 | None | SRR18054802 | MDR-TB | lineage2.2.2 | None | SRR21676523 | HR-TB | lineage2.2.2 | None | ERR551185 | Sensitive | lineage2.2.2 | None | SRR1723436 | Sensitive | lineage2.2.2 | cn | SRR2062305 | RR-TB | lineage2.2.2 | None | SRR21291146 | Sensitive | lineage2.2.2 | None | SRR1710083 | Sensitive | lineage2.2.2 | cn | SRR25207076 | Pre-XDR-TB | lineage2.2.2 | None | SRR15316534 | HR-TB | lineage2.2.2 | None | SRR12062556 | HR-TB | lineage2.2.2 | None | ERR1352347 | RR-TB | lineage2.2.2 | cn | SRR2024893 | MDR-TB | lineage2.2.2 | cn | SRR10305623 | Pre-XDR-TB | lineage2.2.2 | None | SRR25389500 | HR-TB | lineage2.2.2 | None | SRR14519152 | RR-TB | lineage2.2.2 | None | SRR26112222 | Sensitive | lineage2.2.2 | None | SRR6280251 | RR-TB | lineage2.2.2 | cn | SRR25515552 | Sensitive | lineage2.2.2 | None | SRR15316167 | HR-TB | lineage2.2.2 | None | SRR25389495 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013624 | Pre-XDR-TB | lineage2.2.2 | None | SRR21277072 | Sensitive | lineage2.2.2 | None | SRR6280252 | RR-TB | lineage2.2.2 | cn |
---|