lineage | Count |
---|---|
lineage1.2.1.1 | 1 |
lineage4.6.5 | 2 |
lineage4.3.4.2 | 4 |
lineage4.2.1 | 1 |
lineage2.2.1 | 12 |
lineage4.8 | 9 |
La1.2.BCG | 1 |
lineage4.1.2 | 1 |
lineage3 | 1 |
lineage4.8;lineage1.2.2.2 | 1 |
lineage3.1.1 | 1 |
lineage4.2.2.2 | 1 |
lineage4.5 | 2 |
lineage4.4.1.1 | 1 |
lineage4.3.3 | 5 |
lineage4.1.2.1 | 3 |
lineage4.2.1.1 | 1 |
13 | |
lineage4.6.2.2 | 2 |
lineage4.9 | 1 |
La1.8.2 | 2 |
lineage4.3.4.1 | 1 |
spoligotype | Count |
---|---|
None | 66 |
ID | Drug resistance | Lineage | Country iso2 | ERR11050097 | Sensitive | lineage1.2.1.1 | None | ERR11050344 | Sensitive | lineage4.6.5 | None | ERR11050207 | MDR-TB | lineage4.3.4.2 | None | ERR11050209 | MDR-TB | lineage4.3.4.2 | None | ERR11050208 | MDR-TB | lineage4.3.4.2 | None | ERR11050210 | MDR-TB | lineage4.3.4.2 | None | SRR14782417 | MDR-TB | lineage4.2.1 | None | ERR11050449 | Sensitive | lineage2.2.1 | None | ERR11050368 | Sensitive | lineage4.8 | None | SRR14782546 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714850 | Sensitive | lineage4.8 | None | SRR14782719 | Other | La1.2.BCG | None | ERR11050645 | Sensitive | lineage2.2.1 | None | SRR18714859 | Sensitive | lineage4.8 | None | SRR18715037 | MDR-TB | lineage2.2.1 | None | SRR18714977 | Sensitive | lineage4.8 | None | SRR18715193 | Sensitive | lineage4.8 | None | ERR11050874 | Sensitive | lineage2.2.1 | None | SRR18715340 | Pre-XDR-TB | lineage2.2.1 | None | ERR11050801 | Sensitive | lineage4.1.2 | None | ERR11050839 | Other | lineage3 | None | SRR18715263 | Other | lineage2.2.1 | None | ERR11050815 | Sensitive | lineage2.2.1 | None | ERR11067724 | Pre-XDR-TB | lineage4.8;lineage1.2.2.2 | None | ERR11067691 | Sensitive | lineage3.1.1 | None | ERR11050955 | Sensitive | lineage4.2.2.2 | None | ERR11068197 | Sensitive | lineage4.5 | None | ERR11067915 | Sensitive | lineage4.4.1.1 | None | SRR24710228 | Sensitive | lineage4.3.3 | None | ERR11068849 | Sensitive | lineage4.8 | None | SRR23861783 | MDR-TB | lineage4.3.3 | None | SRR23861868 | Other | lineage4.6.5 | None | SRR23861942 | MDR-TB | lineage2.2.1 | None | SRR23862094 | Sensitive | lineage4.3.3 | None | ERR11068719 | Sensitive | lineage4.1.2.1 | None | ERR11068815 | Sensitive | lineage4.2.1.1 | None | SRR23861926 | RR-TB | lineage4.3.3 | None | SRR23861959 | Sensitive | lineage2.2.1 | None | SRR23862106 | Sensitive | lineage4.1.2.1 | None | SRR23862189 | Sensitive | lineage4.3.3 | None | ERR12328162 | Other | lineage4.5 | None | SRR3675234 | Other | None | ERR11051010 | Sensitive | lineage4.8 | None | SRR3675571 | HR-TB | None | ERR3283024 | Other | None | ERR2693231 | Other | None | ERR2693230 | Other | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6045233 | HR-TB | None | ERR11067138 | Sensitive | lineage4.8 | None | SRR6046644 | HR-TB | None | ERR11044933 | Sensitive | lineage4.6.2.2 | None | ERR3797044 | Other | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797061 | Other | None | ERR6140668 | Other | La1.8.2 | None | ERR11049884 | Sensitive | lineage4.3.4.1 | None | ERR6140651 | Other | La1.8.2 | None | ERR11049951 | Sensitive | lineage2.2.1 | None | ERR11049949 | Sensitive | lineage4.8 | None | ERR11049981 | Sensitive | lineage2.2.1 | None | ERR11049955 | HR-TB | lineage4.1.2.1 | None | ERR11049965 | Other | lineage4.6.2.2 | None |
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