lineage | Count |
---|---|
lineage2.2.1 | 22 |
lineage4.5 | 4 |
lineage1.2.1.2.1 | 9 |
lineage1.1.1.1 | 4 |
lineage4.8 | 2 |
lineage1.1.1 | 2 |
lineage2.2.1.1 | 4 |
lineage4.3.3 | 2 |
lineage1.1.2 | 6 |
lineage3 | 13 |
lineage3.1.2.1 | 2 |
lineage3.1.2 | 1 |
lineage4.3.4.2.1 | 2 |
lineage4.3.2 | 2 |
lineage4.2.1.1 | 1 |
lineage4.2.1 | 1 |
lineage4.3.4.1 | 1 |
lineage4.3.4.2 | 1 |
lineage2.2.1;lineage3 | 1 |
lineage2.1 | 2 |
lineage4.1.1.3 | 1 |
lineage2.2.1;lineage4.5 | 1 |
lineage4.3 | 1 |
lineage4.1.2.1 | 2 |
lineage2.2.2 | 1 |
lineage4 | 1 |
lineage4.4.2 | 1 |
lineage4.9 | 1 |
lineage4.1.1.1 | 1 |
spoligotype | Count |
---|---|
None | 92 |
ID | Drug resistance | Lineage | Country iso2 | SRR27450334 | Sensitive | lineage2.2.1 | None | SRR27450590 | Sensitive | lineage4.5 | None | SRR27450555 | Sensitive | lineage1.2.1.2.1 | None | SRR27450293 | HR-TB | lineage1.1.1.1 | None | SRR27450584 | Sensitive | lineage4.8 | None | SRR27450576 | Sensitive | lineage1.1.1 | None | SRR26558637 | MDR-TB | lineage2.2.1.1 | None | SRR24255993 | MDR-TB | lineage4.3.3 | None | SRR26937151 | MDR-TB | lineage2.2.1 | None | SRR27450335 | Sensitive | lineage2.2.1 | None | SRR21733193 | Sensitive | lineage1.1.2 | None | SRR27450019 | Sensitive | lineage3 | None | SRR27450147 | Sensitive | lineage3.1.2.1 | None | SRR27450523 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR27450020 | Sensitive | lineage3 | None | SRR16088123 | Pre-XDR-TB | lineage2.2.1 | None | SRR27450307 | HR-TB | lineage2.2.1 | None | SRR26111973 | Sensitive | lineage3.1.2 | None | SRR27450377 | Sensitive | lineage4.3.4.2.1 | None | SRR21733345 | Sensitive | lineage1.2.1.2.1 | None | SRR27450110 | Sensitive | lineage4.3.4.2.1 | None | SRR24799197 | Sensitive | lineage4.3.2 | None | SRR27450578 | Sensitive | lineage2.2.1 | None | SRR27450310 | Sensitive | lineage2.2.1 | None | SRR26111989 | Sensitive | lineage2.2.1 | None | SRR27450143 | Sensitive | lineage3 | None | SRR27450541 | Sensitive | lineage3 | None | SRR27449982 | Sensitive | lineage4.2.1.1 | None | SRR26965295 | Pre-XDR-TB | lineage2.2.1 | None | SRR26112024 | Sensitive | lineage4.8 | None | SRR24710102 | XDR-TB | lineage2.2.1 | None | SRR27450423 | Other | lineage3.1.2.1 | None | SRR27450508 | Sensitive | lineage1.2.1.2.1 | None | SRR26112354 | Sensitive | lineage4.2.1 | None | SRR27450428 | Sensitive | lineage4.5 | None | SRR16088198 | MDR-TB | lineage2.2.1 | None | SRR26112447 | Sensitive | lineage4.3.4.1 | None | SRR26112374 | Sensitive | lineage2.2.1 | None | SRR21733271 | Sensitive | lineage4.5 | None | SRR27450582 | Other | lineage1.2.1.2.1 | None | SRR26111940 | Sensitive | lineage3 | None | SRR27450532 | HR-TB | lineage2.2.1 | None | SRR27449981 | Sensitive | lineage3 | None | SRR27450337 | Sensitive | lineage4.3.4.2 | None | SRR25827399 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR27450002 | Sensitive | lineage2.1 | None | SRR26397804 | Other | lineage4.1.1.3 | None | SRR27450591 | Sensitive | lineage2.2.1 | None | SRR27450557 | Sensitive | lineage3 | None | SRR25827769 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR21733354 | Sensitive | lineage1.2.1.2.1 | None | SRR21733072 | Other | lineage2.2.1.1 | None | SRR26112562 | Sensitive | lineage4.3 | None | SRR26111963 | Sensitive | lineage4.1.2.1 | None | SRR27450294 | Sensitive | lineage2.1 | None | SRR26112748 | HR-TB | lineage4.1.2.1 | None | SRR27450435 | Sensitive | lineage3 | None | SRR26112017 | Sensitive | lineage2.2.1 | None | SRR24709932 | MDR-TB | lineage2.2.1 | None | SRR26558640 | HR-TB | lineage1.1.1.1 | None | SRR27449997 | Sensitive | lineage1.1.1 | None | SRR21732812 | Sensitive | lineage2.2.2 | None | SRR27450141 | Other | lineage2.2.1 | None | SRR24710086 | Sensitive | lineage2.2.1 | None | SRR27450509 | Sensitive | lineage3 | None | SRR21732809 | Sensitive | lineage4 | None | SRR27450353 | Sensitive | lineage1.2.1.2.1 | None | SRR27450156 | Sensitive | lineage2.2.1.1 | None | SRR21733204 | Sensitive | lineage1.1.2 | None | SRR21732808 | Sensitive | lineage3 | None | SRR27450331 | HR-TB | lineage1.2.1.2.1 | None | SRR26112435 | Other | lineage3 | None | SRR21733344 | Sensitive | lineage2.2.1 | None | SRR27450560 | Sensitive | lineage1.1.2 | None | SRR27450016 | Sensitive | lineage1.1.2 | None | SRR27450101 | Sensitive | lineage4.3.3 | None | SRR27450545 | Sensitive | lineage3 | None | SRR26124830 | Sensitive | lineage4.4.2 | None | SRR26112572 | Sensitive | lineage4.5 | None | SRR27450343 | Sensitive | lineage2.2.1 | None | SRR27450592 | Sensitive | lineage3 | None | SRR27450309 | Sensitive | lineage1.1.1.1 | None | SRR27450593 | Sensitive | lineage4.3.2 | None | SRR27450142 | Sensitive | lineage1.2.1.2.1 | None | SRR27450003 | Sensitive | lineage1.1.1.1 | None | SRR27450185 | Sensitive | lineage2.2.1 | None | SRR21733138 | Sensitive | lineage1.1.2 | None | SRR27450192 | Sensitive | lineage4.9 | None | SRR21732815 | Sensitive | lineage1.1.2 | None | SRR28859979 | Sensitive | lineage4.1.1.1 | None | SRR28860046 | Sensitive | lineage1.2.1.2.1 | None | SRR28434998 | MDR-TB | lineage2.2.1 | None |
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