lineage | Count |
---|---|
lineage3 | 1 |
lineage2.1;lineage4.9;lineage6.3 | 6 |
La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
lineage2.2.1;lineage3 | 1 |
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
lineage2.1 | 1 |
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
lineage4.1.2.1 | 1 |
lineage4.9;lineage6.3 | 2 |
4 | |
lineage4.9 | 2 |
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
M.canetti;lineage2.1;lineage4.9 | 1 |
lineage2.1;lineage4.9 | 2 |
La3;lineage2 | 1 |
La3;lineage2.1;lineage6.3 | 1 |
lineage2.1;lineage6.3 | 2 |
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
La3;lineage4.9 | 1 |
lineage2.2.1;lineage6.3 | 1 |
lineage2.2.1 | 1 |
spoligotype | Count |
---|---|
None | 34 |
ID | Drug resistance | Lineage | Country iso2 | ERR4800341 | HR-TB | lineage3 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR736863 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR9786604 | Other | None | SRR28119805 | Other | lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR25827682 | Other | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR26159043 | Other | lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR9117709 | Other | None | SRR3675236 | Other | None |
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