Rv0667 - p.Ala286Val
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
12 RR-TB
0 HR-TB
174 MDR-TB
69 Pre-XDR-TB
3 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 130 |
| lineage4.3.4.2 | 54 |
| lineage1.1.2 | 3 |
| lineage4.3.3;lineage4.3.4.1 | 2 |
| lineage4.1.2.1 | 10 |
| lineage4.3.3 | 7 |
| lineage4.2.1 | 3 |
| lineage2.2.1.1 | 2 |
| lineage4.8 | 18 |
| lineage4.3.2 | 1 |
| lineage2.2.1.2 | 3 |
| lineage4.1.2.1;lineage4.2.1 | 2 |
| lineage3 | 5 |
| lineage4.4.2 | 5 |
| lineage4.3.4.1 | 5 |
| lineage4.3.3;lineage4.3.4.2 | 2 |
| lineage2.2.1;lineage4.2.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.9 | 1 |
| lineage4.2.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.3.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 258 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR25207376 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207083 | Pre-XDR-TB | lineage2.2.1 | None | SRR13583368 | MDR-TB | lineage4.3.4.2 | None | SRR13583350 | MDR-TB | lineage4.3.4.2 | None | ERR4553617 | MDR-TB | lineage1.1.2 | None | SRR15316023 | MDR-TB | lineage2.2.1 | None | ERR6879035 | MDR-TB | lineage4.3.3;lineage4.3.4.1 | None | ERR551707 | MDR-TB | lineage4.1.2.1 | None | SRR25515125 | MDR-TB | lineage2.2.1 | None | SRR9224934 | MDR-TB | lineage4.3.4.2 | None | SRR25207191 | MDR-TB | lineage2.2.1 | None | ERR11043022 | MDR-TB | lineage4.3.3 | None | SRR23310870 | MDR-TB | lineage2.2.1 | None | ERR6866463 | RR-TB | lineage4.3.3 | None | SRR25207377 | MDR-TB | lineage2.2.1 | None | SRR29051348 | MDR-TB | lineage4.3.4.2 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | SRR29051597 | MDR-TB | lineage4.3.4.2 | None | SRR29051339 | MDR-TB | lineage4.3.4.2 | None | SRR29051297 | MDR-TB | lineage4.3.4.2 | None | SRR9224909 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR25207189 | MDR-TB | lineage2.2.1 | None | ERR3794358 | MDR-TB | lineage2.2.1 | None | SRR29051366 | MDR-TB | lineage4.3.4.2 | None | ERR13258452 | Pre-XDR-TB | lineage2.2.1 | None | SRR25206968 | Pre-XDR-TB | lineage2.2.1 | None | SRR13583372 | MDR-TB | lineage4.3.4.2 | None | SRR10040464 | MDR-TB | lineage2.2.1 | None | SRR29050889 | MDR-TB | lineage4.3.4.2 | None | SRR9224982 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR10380094 | MDR-TB | lineage4.2.1 | None | ERR6866476 | RR-TB | lineage4.3.3 | None | SRR6832240 | MDR-TB | lineage2.2.1 | None | SRR069943 | MDR-TB | lineage2.2.1.1 | None | SRR12142342 | Pre-XDR-TB | lineage2.2.1 | None | SRR1166865 | MDR-TB | lineage4.8 | None | ERR4827792 | MDR-TB | lineage2.2.1 | None | ERR4796309 | Pre-XDR-TB | lineage1.1.2 | None | ERR551708 | MDR-TB | lineage4.1.2.1 | None | SRR29050908 | MDR-TB | lineage4.3.4.2 | None | SRR29081639 | MDR-TB | lineage4.3.2 | None | SRR25207332 | MDR-TB | lineage2.2.1 | None | SRR28859762 | MDR-TB | lineage2.2.1.2 | None | SRR25207184 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284786 | MDR-TB | lineage2.2.1 | None | SRR29050882 | MDR-TB | lineage4.3.4.2 | None | SRR9224976 | MDR-TB | lineage4.3.4.2 | None | SRR6356993 | Pre-XDR-TB | lineage4.1.2.1;lineage4.2.1 | None | SRR29051298 | MDR-TB | lineage4.3.4.2 | None | SRR9224978 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR29539140 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714875 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539763 | MDR-TB | lineage2.2.1 | None | SRR25207225 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510549 | Pre-XDR-TB | lineage3 | pk | ERR11081218 | MDR-TB | lineage4.8 | None | ERR1034757 | MDR-TB | lineage4.3.3;lineage4.3.4.1 | pe | ERR13285162 | MDR-TB | lineage4.8 | None | ERR13284543 | MDR-TB | lineage4.3.3 | None | SRR13583409 | MDR-TB | lineage4.3.4.2 | None | SRR9224991 | MDR-TB | lineage4.3.4.2 | None | ERR4800326 | MDR-TB | lineage2.2.1 | in | SRR1173223 | MDR-TB | lineage2.2.1 | None | ERR4798389 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR1723647 | MDR-TB | lineage2.2.1 | None | SRR25207327 | MDR-TB | lineage4.4.2 | None | ERR4810468 | MDR-TB | lineage2.2.1 | cn | ERR4810970 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4811354 | MDR-TB | lineage2.2.1 | cn | ERR751486 | MDR-TB | lineage4.1.2.1 | pe | SRR28394016 | RR-TB | lineage4.3.4.2 | None | ERR502949 | MDR-TB | lineage2.2.1 | None | ERR502944 | MDR-TB | lineage2.2.1 | None | ERR4810949 | Pre-XDR-TB | lineage2.2.1 | cn | ERR9992933 | XDR-TB | lineage2.2.1 | None | ERR4811359 | MDR-TB | lineage4.4.2 | cn | ERR4809305 | MDR-TB | lineage2.2.1 | za | ERR4810467 | Pre-XDR-TB | lineage2.2.1 | cn | SRR2024887 | MDR-TB | lineage2.2.1 | cn | ERR4822583 | MDR-TB | lineage2.2.1 | tm | SRR2024882 | MDR-TB | lineage2.2.1 | cn | ERR4811294 | XDR-TB | lineage2.2.1 | cn | ERR2707131 | MDR-TB | lineage4.3.4.1 | cd | ERR6866771 | MDR-TB | lineage4.3.4.1 | None | SRR10305973 | MDR-TB | lineage2.2.1 | None | SRR10305975 | MDR-TB | lineage2.2.1 | None | SAMEA2534134 | MDR-TB | lineage4.1.2.1 | uz | SRR1196678 | MDR-TB | lineage2.2.1 | None | SRR21277863 | Pre-XDR-TB | lineage4.4.2 | None | SRR29017042 | MDR-TB | lineage1.1.2 | None | SAMN02419679 | Pre-XDR-TB | lineage2.2.1 | by | SRR29231832 | MDR-TB | lineage4.3.4.1 | None | ERR9992906 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040429 | MDR-TB | lineage2.2.1 | None | SRR10305614 | MDR-TB | lineage2.2.1 | None | ERR13290270 | MDR-TB | lineage4.8 | None | SRR25206953 | XDR-TB | lineage2.2.1 | None | SRR1165468 | MDR-TB | lineage4.8 | None | SRR9224979 | MDR-TB | lineage4.3.4.2 | None | SRR11662525 | MDR-TB | lineage2.2.1 | None | ERR11067839 | MDR-TB | lineage2.2.1 | None | SRR18715401 | MDR-TB | lineage2.2.1 | None | SRR21691101 | MDR-TB | lineage4.1.2.1 | None | SRR29050646 | MDR-TB | lineage4.3.4.2 | None | SRR29017037 | MDR-TB | lineage4.8 | None | SRR6257047 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723632 | MDR-TB | lineage2.2.1 | cn | SRR1723633 | MDR-TB | lineage2.2.1 | cn | SRR29050706 | MDR-TB | lineage4.3.4.2 | None | SRR1723645 | MDR-TB | lineage2.2.1 | cn | SRR6356970 | Pre-XDR-TB | lineage4.1.2.1;lineage4.2.1 | None | SRR25207194 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801788 | MDR-TB | lineage2.2.1 | None | SRR24709922 | MDR-TB | lineage2.2.1 | None | ERR3639752 | MDR-TB | lineage2.2.1 | None | SRR29051567 | MDR-TB | lineage4.3.4.2 | None | SRR13583476 | MDR-TB | lineage4.3.4.2 | None | ERR13284114 | MDR-TB | lineage2.2.1 | None | SRR29051267 | MDR-TB | lineage4.3.4.2 | None | SRR29050644 | MDR-TB | lineage4.3.4.2 | None | SRR13583488 | MDR-TB | lineage4.3.4.2 | None | SRR1162764 | RR-TB | lineage4.8 | None | SRR1723646 | MDR-TB | lineage2.2.1 | None | SRR29051520 | MDR-TB | lineage4.3.4.2 | None | SRR29050864 | MDR-TB | lineage4.3.3;lineage4.3.4.2 | None | SRR9224925 | MDR-TB | lineage4.3.4.2 | None | SRR5153254 | Pre-XDR-TB | lineage2.2.1 | None | SRR25206972 | Pre-XDR-TB | lineage2.2.1 | None | SRR25389551 | Pre-XDR-TB | lineage2.2.1 | None | SRR28706384 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539747 | MDR-TB | lineage2.2.1 | None | SRR13583393 | MDR-TB | lineage4.3.4.2 | None | SRR9225004 | MDR-TB | lineage4.3.4.2 | None | SRR20969901 | MDR-TB | lineage2.2.1 | None | SRR29050684 | MDR-TB | lineage4.3.4.2 | None | ERR13284344 | MDR-TB | lineage4.2.1 | None | ERR3148221 | MDR-TB | lineage4.3.3 | mx | SRR10305977 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539226 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827574 | MDR-TB | lineage2.2.1 | None | ERR4799460 | Pre-XDR-TB | lineage2.2.1 | in | SRR13583383 | MDR-TB | lineage4.3.4.2 | None | SRR29051559 | MDR-TB | lineage4.3.4.2 | None | SRR29051491 | MDR-TB | lineage4.3.4.2 | None | SRR9224926 | MDR-TB | lineage4.3.4.2 | None | ERR4800077 | Pre-XDR-TB | lineage2.2.1 | in | SRR9224961 | MDR-TB | lineage4.3.4.2 | None | SAMN02414843 | RR-TB | lineage4.8 | se | ERR3287537 | MDR-TB | lineage4.3.4.1 | None | SRR7657748 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR4810942 | MDR-TB | lineage2.2.1 | cn | SRR2024965 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4811160 | Pre-XDR-TB | lineage2.2.1 | cn | ERR775296 | RR-TB | lineage4.3.3 | pe | SRR15368792 | Pre-XDR-TB | lineage4.4.2 | None | ERR3794434 | MDR-TB | lineage2.2.1 | None | ERR2510666 | Pre-XDR-TB | lineage2.2.1 | it | SRR1165587 | RR-TB | lineage4.8 | None | ERR2516911 | Pre-XDR-TB | lineage2.2.1 | gb | ERR2515373 | MDR-TB | lineage2.2.1 | za | ERR2515263 | MDR-TB | lineage2.2.1 | za | SRR6824468 | MDR-TB | lineage2.2.1 | cn | SRR6824578 | MDR-TB | lineage2.2.1 | cn | SRR6824641 | MDR-TB | lineage2.2.1 | cn | SRR6824601 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6824362 | MDR-TB | lineage2.2.1 | cn | SRR1167123 | MDR-TB | lineage4.8 | None | SRR6824361 | MDR-TB | lineage2.2.1 | cn | SRR29051540 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR1169140 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539220 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488384 | MDR-TB | lineage2.2.1 | None | SRR20969395 | MDR-TB | lineage2.2.1 | None | ERR13284648 | MDR-TB | lineage3 | None | SRR28045245 | Pre-XDR-TB | lineage2.2.1 | None | SRR29050701 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR3794409 | MDR-TB | lineage2.2.1 | None | SRR11662523 | MDR-TB | lineage2.2.1 | None | ERR12118038 | MDR-TB | lineage4.1.2.1 | None | SAMN03246387 | MDR-TB | lineage2.2.1 | None | SRR13583418 | MDR-TB | lineage4.3.4.2 | None | ERR11488818 | MDR-TB | lineage2.2.1 | None | SRR1162739 | MDR-TB | lineage4.8 | None | SRR25207355 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081136 | MDR-TB | lineage3 | None | ERR551708_ERR551707 | MDR-TB | lineage4.1.2.1 | None | ERR13291043 | Pre-XDR-TB | lineage2.2.1 | None | ERR2515633 | MDR-TB | lineage2.2.1 | za | SRR25207362 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810943 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4810993 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4811326 | Pre-XDR-TB | lineage2.2.1 | cn | ERR3273196 | MDR-TB | lineage2.2.1.2 | None | SRR26936923 | RR-TB | lineage2.2.1 | None | ERR3275811 | MDR-TB | lineage4.1.2.1 | nl | SRR25389552 | Pre-XDR-TB | lineage2.2.1 | None | SRR29681420 | MDR-TB | lineage2.2.1 | None | ERR4829855 | Pre-XDR-TB | lineage2.2.1 | None | SRR29051273 | MDR-TB | lineage4.3.4.2 | None | SRR1184296 | MDR-TB | lineage2.2.1 | None | SRR28859651 | MDR-TB | lineage2.2.1.2 | None | SRR29051013 | MDR-TB | lineage4.3.4.2 | None | ERR4553767 | MDR-TB | lineage4.8 | None | SRR29051275 | MDR-TB | lineage4.3.4.2 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR11043605 | MDR-TB | lineage4.2.1 | None | SRR16370484 | Pre-XDR-TB | lineage2.2.1 | None | SRR29051349 | MDR-TB | lineage4.3.4.2 | None | SRR29050647 | MDR-TB | lineage4.3.4.2 | None | ERR13290271 | MDR-TB | lineage4.8 | None | ERR2653186 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR29050861 | MDR-TB | lineage4.3.4.2 | None | ERR11488721 | MDR-TB | lineage2.2.1 | None | SRR29539651 | Pre-XDR-TB | lineage2.2.1 | None | SRR29051296 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR29051033 | MDR-TB | lineage4.3.4.2 | None | SRR29681312 | MDR-TB | lineage2.2.1 | None | SRR9224931 | MDR-TB | lineage4.3.4.2 | None | ERR5864112 | Pre-XDR-TB | lineage2.2.1 | None | DRR130145 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510550 | Pre-XDR-TB | lineage3 | pk | ERR13290272 | MDR-TB | lineage4.8 | None | DRR130213 | Pre-XDR-TB | lineage2.2.1 | None | SRR29050664 | MDR-TB | lineage4.3.4.2 | None | ERR13290273 | MDR-TB | lineage4.8 | None | SRR1163380 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165520 | RR-TB | lineage4.8 | None | ERR4796792 | MDR-TB | lineage4.2.2.2 | in | SRR29051234 | MDR-TB | lineage4.3.4.2 | None | ERR2307365 | MDR-TB | lineage2.2.1 | None | SRR1163178 | Pre-XDR-TB | lineage2.2.1 | None | SRR13583396 | MDR-TB | lineage4.3.3;lineage4.3.4.2 | None | ERR13291045 | MDR-TB | lineage4.9 | None | SRR29539295 | MDR-TB | lineage2.2.1 | None | SAMN02414846 | MDR-TB | lineage4.8 | se | ERR4872268 | MDR-TB | lineage2.2.1 | None | SRR6832202 | Pre-XDR-TB | lineage2.2.1 | None | ERR4809204 | MDR-TB | lineage2.2.1 | za | SRR27069394 | Pre-XDR-TB | lineage4.4.2 | None | SRR27069420 | Pre-XDR-TB | lineage4.2.2 | None | SRR6397810 | MDR-TB | lineage3 | ca | SRR25207050 | MDR-TB | lineage2.2.1 | None | SRR25207197 | MDR-TB | lineage2.2.1 | None | SRR1166931 | RR-TB | lineage4.8 | None | ERR502947 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829053 | RR-TB | lineage4.6.2.2 | None | SRR1174839 | Pre-XDR-TB | lineage2.2.1 | None | ERR1873483 | MDR-TB | lineage4.3.2.1 | za | ERR2510201 | RR-TB | lineage4.3.3 | pe | SRR25207371 | Pre-XDR-TB | lineage2.2.1 | None | SRR9224944 | MDR-TB | lineage4.3.4.2 | None | SRR10040252 | MDR-TB | lineage2.2.1 | None | SAMN02586062 | MDR-TB | lineage2.2.1 | za | ERR11488365 | MDR-TB | lineage2.2.1 | None | SRR29051590 | MDR-TB | lineage4.3.4.2 | None | SRR25389550 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207100 | MDR-TB | lineage2.2.1 | None | SRR25207186 | MDR-TB | lineage2.2.1 | None |
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